Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq18 104 3e-17 >seq18 Length=517648 Score = 104 bits (114), Expect = 3e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 104144 CACCTACCAGGGGGCCACCGTGCTGGCGCCCAAGACCTCCTTCTACAACACGCCCGTCGC 104203 ||||||| |||| |||||||| | | |||||||| |||||||| | ||| | || Sbjct 253769 CACCTACGAGGGCGCCACCGTCATCGAGCCCAAGAAAGCCTTCTACCAGGACCCCATTGC 253828 Query 104204 CGTGCTGGACTTCGCCAGCCTCTACCCCAGCATCATCCAGGCCTACAACCTCTGCTACTC 104263 | |||||||||||| || |||||| |||||| ||||||| |||||||||||||| Sbjct 253829 CACCCTGGACTTCGCCTCTCTGTACCCCTCCATCATGCAGGCCTTTAACCTCTGCTACTC 253888 Query 104264 CACCCTCGTC 104273 ||||||| || Sbjct 253889 CACCCTCCTC 253898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658733567779840