Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_028895.1 Length=116138 Score E Sequences producing significant alignments: (Bits) Value seq684 86.0 5e-12 >seq684 Length=114989 Score = 86.0 bits (94), Expect = 5e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 38961 CTGGGCTTGAACCAGCGACCTCACCCTTATGAGGGGTTTGCTCTAACCAACTAAGCTAAA 39020 |||| |||||||||| |||||||||||||| |||||| |||||||||||||| |||||| Sbjct 49631 CTGGACTTGAACCAGGGACCTCACCCTTATCAGGGGTGTGCTCTAACCAACTGAGCTAAT 49572 Query 39021 GGCGCTA 39027 || ||| Sbjct 49571 AGCCCTA 49565 Score = 86.0 bits (94), Expect = 5e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 38961 CTGGGCTTGAACCAGCGACCTCACCCTTATGAGGGGTTTGCTCTAACCAACTAAGCTAAA 39020 |||| |||||||||| |||||||||||||| |||||| |||||||||||||| |||||| Sbjct 113179 CTGGACTTGAACCAGGGACCTCACCCTTATCAGGGGTGTGCTCTAACCAACTGAGCTAAT 113238 Query 39021 GGCGCTA 39027 || ||| Sbjct 113239 AGCCCTA 113245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 371513702943076