Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq25 91.5 2e-13 >seq25 Length=633890 Score = 91.5 bits (100), Expect = 2e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 78496 GTCAGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACATCAACCGAACGC 78555 |||| ||| ||||| ||||| ||||||||||||| || || | || | |||||| Sbjct 456228 GTCAAGAGTGCGTAAGAGGCAATATTGAACGGCACACCCAACCCCATGTCTGCGGAACGC 456169 Query 78556 TGATACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAGAAACA-GTGACA 78614 |||||| ||| ||| || | |||| ||| ||| ||| | ||||| |||||| Sbjct 456168 TGATACATCTGACAAGAGAGCTCTCCGTCTGCCACGTAGAATTGGCA-AAACATGTGACA 456110 Query 78615 CGGACGCAATGCCATTTTATCCAGATCAACAGGGTTCCATGCGGAAACGATGATCCCGCG 78674 ||| ||| ||||| || ||| ||| | |||||||| || || || ||||| | ||| Sbjct 456109 CGGCGGCAGGGCCATCTTTCCCAAATCCGCGGGGTTCCAGGCCGATACAATGATGCGGCG 456050 Query 78675 ATCGTCTGG 78683 ||| ||||| Sbjct 456049 ATCCTCTGG 456041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568468739550720