Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F001614215.1_202016-04- 08] 6,860 sequences; 25,618,953 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq259 98.7 8e-16 >seq259 Length=12200 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 |||||||| || ||||| ||||| || | || || ||||||||||||| || ||| Sbjct 5772 GTAGACTCTTTCTGAATGTTGTAGTCAGACAACGTGCGCCCGTCCTCCAGCTGCTTCCCC 5713 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| |||| || | ||||||||| ||| | ||||| ||||| ||| ||||| || Sbjct 5712 GCAAAAATGAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCTGCTTC 5653 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | ||| || || | |||||| |||| || ||||| || || || | || Sbjct 5652 ACATTCTCGATCGTGTCACTGGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAGCGTC 5593 Query 19025 TTGACAAAAATTTGCAT 19041 || ||||| |||||||| Sbjct 5592 TTAACAAAGATTTGCAT 5576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414538139122840