Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F001614215.1_202016-04- 08] 6,860 sequences; 25,618,953 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6464 89.7 4e-13 >seq6464 Length=44462 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| |||| || || |||| || | || |||||| | Sbjct 38587 ATGCAAATTTTCGTTAAGACCCTGACGGGCAAGACCATTACTTTGGACGTGGAGCCCAGC 38528 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| |||||||||| ||| ||||| || ||||| || ||||| || Sbjct 38527 GACACCATTGAGAATGTGAAGCAAAAGATCCAGGACAAGGAGGGGATCCCCCCTGATCAG 38468 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATG 25155 ||||| | |||||||||||||| || | || |||| Sbjct 38467 CAGCGCCTCATTTTTGCCGGCAAGCAGCTCGAGGATG 38431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433291771070900