Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F001614215.1_202016-04- 08] 6,860 sequences; 25,618,953 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2149 336 4e-87 seq1319 221 2e-52 seq4979 100 5e-16 seq5823 95.1 2e-14 >seq2149 Length=43014 Score = 336 bits (372), Expect = 4e-87 Identities = 1083/1649 (66%), Gaps = 65/1649 (4%) Strand=Plus/Minus Query 243769 GGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGC 243828 ||||| ||||||||||||||||||||||| || | ||||| | || |||||||| Sbjct 35078 GGTCCGTAGGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGGAATAGAAGTGCATGGA 35019 Query 243829 CGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTG 243888 || |||| | || | |||| | || || | || ||||| ||||| Sbjct 35018 GGTGAGCTG-------TGCAG----GCGTCGGATTGGC-CAAATGGATATTGAGAGACTG 34971 Query 243889 GCTCTGGTCGACGAAGGGCGCC-CGCTCTGCGGCCATGGT-GATGAGGTCCTTCTGAGAT 243946 ||| || | ||| |||| || || |||||| |||| ||| | | |||||| Sbjct 34970 CGACTGACAGATGTAGG-CGCCGCGGTCGGCGGCC-TGGTCGATCACGCACTTCTGCCGG 34913 Query 243947 ATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGC 244006 ||||| || | |||||||| | | |||||| | | |||| | | | ||||| Sbjct 34912 ATCTCCCACACTGTCTTGTACAGGTCCTTGAGCTCCCGAGGGATGCTGGCCACATTCTGG 34853 Query 244007 ACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAG-CG 244065 || |||||| ||| | | || | || | || | | | |||||||||| | || Sbjct 34852 ACTGAGCCCCTGTTGCCCATAATTTGATTTCGGACTTCAGAAGTCCACAGGCCTTGGTCG 34793 Query 244066 CTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCG 244125 | || | || ||||| | ||||||||||| || || |||| || |||||| || Sbjct 34792 ATG-AGGTCGCGGAGCAGGTACTTGTTCACCACCGTGAATTCGCCCGCCAACACGCGACG 34734 Query 244126 CTGGTAGAGGTT-GCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCG 244184 ||| | ||| | || ||| ||||| | ||| |||||||||| |||||||| | Sbjct 34733 GGAGTACATGTTCGATG-TGAAAGGCTCAACAGACTCGTTGTTGCCCAGGATCTGCGCAG 34675 Query 244185 TGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGA-TG 244243 | || || |||||||| | | || || ||| | || |||||| ||| | | Sbjct 34674 TAGATGCGGTAGGCATGGGTGCGAGCAATAGTGAGTTGCGGACACCGTGCTCCTGCACTT 34615 Query 244244 CGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCAC 244303 | || | | | || ||||||||| |||| | | | | | ||||||| Sbjct 34614 TGAAGCGTAAAC-CGGCCCAGTCCCAG-----CGAGTTGA----GGGGGTCACGCCCCAC 34565 Query 244304 ATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCG 244363 ||||| || || | | |||||||| | |||| ||| || ||||| ||||||||| Sbjct 34564 ATGTCGAATTGGAAGACGCCCTTGCTCATGGGGGAGCCGGCGAAGGTCTCGTAGGGACCC 34505 Query 244364 TCGCGCTGGGCCAGCTTACAGCT-CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGAT 244422 || | || | || || | | | || | || || |||| ||||||||||| || Sbjct 34504 TCCTTCATCGCGATCTC-CATCGACGCCTCTACCGCCCCGAAGTACATGGTCTCGAAAAT 34446 Query 244423 CATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT--GAAGGGGATGCCCATCATCATGAAG 244480 |||||| | | |||||| ||| || ||| |||| | |||| | |||||| Sbjct 34445 GTCCTTGTTAAGCTGCTGGGCCT--CCGGAGACTCGAATGGGAATCGCATCTTGATGAAG 34388 Query 244481 ACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATG 244540 |||| |||| |||||||||||||| |||||||| | ||||||| |||| |||||| || Sbjct 34387 GCGTCCGCCAAACCCTGCACGCCGATCCCGATGGGGCGGTGTCGCATGTTCGAGCGCCTG 34328 Query 244541 GCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCA-- 244598 ||||| || ||||| ||||| |||||| || ||| ||||| || || | || Sbjct 34327 GCTTCCTCGACAGGGTAGTAGTTGATGTCGATGACGCGGTTCAGGTTTCGTGTCACCACC 34268 Query 244599 TGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCG-GCGATGGTG 244657 | || || || |||| |||| | |||||| || || || || || | | Sbjct 34267 TTCGT--GATTTCATACAGCCGCTGCAGGTCGTAA--GTGGGCGTCTTCCCGCTACCGGA 34212 Query 244658 ATCCTCACA-------AACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTC 244710 |||| | || || ||| ||| ||||||||||||||| || ||||| Sbjct 34211 GCCCTCCCCTTGGATGAATGCGGAAAGGTTCACGGAGGCCAGGTTGCAGACCGCGACCTC 34152 Query 244711 CTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAG 244770 || | ||||||| || ||||| ||||| || || | ||||||||||||| Sbjct 34151 ATCGGGCGACGTGTACTCGATGATCTCCGTGCACAGATTGGATGATTTGATGGTGCCCAA 34092 Query 244771 GTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGT 244830 || ||| || || || || |||||||||||||||| | |||||| | ||| || || Sbjct 34091 GTTCTGCTGGTTTGATTTCAGGTTGCAGGCGTCCTTGAACAGCATGTAAGGCGTGCCTGT 34032 Query 244831 CTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAG 244889 ||| | ||||| | | || | ||| | |||||| | | ||||| | | |||| | Sbjct 34031 CTCCACCTGGGAGTCCAGAATCGC-GAACCAGAGCTGCTGGGCCTTAATAACCTTGCGTG 33973 Query 244890 CCTTGCC-CTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCG 244948 | || || |||| |||||||| || ||| || | ||||| ||| || || || Sbjct 33972 CTTTCCCACTCT-TCTCGTAGCTGGCGTAGAGCTGGTTAAACTCCTCGCCGCACACGTCC 33914 Query 244949 TCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTC 245008 | ||||| |||||| ||||| | || ||| || ||| || || || | | Sbjct 33913 GCCAGGCCCGGGCACTCGTTGGGGCAAAAAAGGGACCAGTCCCCGTCGCTCTCCACGCGC 33854 Query 245009 TGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCC 245068 ||||||| |||||||| |||||||||| | ||| || || | | | || | || Sbjct 33853 CGCATGAACAGGTCGGGCGTCCAGAGGGCGTAGAACAGATCACGTGCACGCTCCAACTCG 33794 Query 245069 GAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATG 245128 ||| |||||| | ||| |||| || ||||||| ||| | ||||||||||| | | Sbjct 33793 TTGCCGTGGTTCTTACGCAGGTCCAGGAATTCAAAGATGTCTGCATGCCAGGGCTCTAGG 33734 Query 245129 TAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC--- 245185 |||| |||| || || |||||| || |||||||| | | | || || Sbjct 33733 TAGATGGCGAAGGAACCCTTGCGCTTGCCTCCGCCCTGGTCGA----CGTAGCGGGCCGT 33678 Query 245186 -GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGAT 245244 ||||||| | ||| || |||| || |||||||| ||| |||||| | || || Sbjct 33677 ATCGTTGAAAACGCGGAGCATAGGTACGATGCCGTTGGAGGTGCCGTTCGATCCACGAAT 33618 Query 245245 GTAGGCGCCCTTGC-CCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGG 245303 ||||| | || || ||| | |||| |||||| | ||| | || || || |||| Sbjct 33617 GTAGGAG-TCTCGCGCCCGAATGTTGTGGATGGATACGCCAATCCCACCCGCAAATTTGG 33559 Query 245304 AGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGT 245363 | ||| ||||| ||||| |||||| ||||| || ||| |||| ||||||| Sbjct 33558 AAATGGCAGCGCATTGCTTGAGGGTGTCGTAGATGCCGTCGATGGAGTCCTCCTTCATGG 33499 Query 245364 TGAGCAGAAAGCAGGAGGACAGCTGGGGC 245392 | || || ||||||||||| || |||||| Sbjct 33498 TCAGGAGGAAGCAGGAGGAGAGTTGGGGC 33470 >seq1319 Length=24917 Score = 221 bits (244), Expect = 2e-52 Identities = 500/748 (67%), Gaps = 8/748 (1%) Strand=Plus/Plus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 |||||||||||||| |||||||| |||| | | ||||| ||||| ||||||||||| || Sbjct 9017 GCCAGGTTGCAGACCGCCACCTCTTCCGCGCTCGTGTATTGGACGATCTCGGTGCACAGA 9076 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 || ||||||||||||||| || ||| || ||| ||| |||||| ||||||||| Sbjct 9077 TTGGATGACTTGATGGTGCCCAAGTTCTGTTGGTTGCTCTTCAGGTTGCAAGCGTCCTTG 9136 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867 || |||||| ||||| || ||||| | ||| | | | | || | ||| | |||| Sbjct 9137 TACAGCATGTAGGGCGTGCCCGTCTCAATCTGCGAGTCCAAGATGGCAAACCACAAGTCC 9196 Query 244868 CTAGCCTTGACCGTCCTGCGAGCCT-TGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 ||| || || || | | || ||||||| ||||| || ||| || Sbjct 9197 TGAGCACGCACTGT-CTTCTTGACTCGGCCCTCTCGTTCGTATTTTAAATATAGGTCCCG 9255 Query 244927 GAACTCGGGGCC---CCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983 ||| | |||| ||| || || || ||||||||| | || |||||||| Sbjct 9256 GAAGGCCTGGCCGTGGCAGTCCGCG---AGACCGGGGCACTGATCGGGACACATGAGGGA 9312 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| | | |||| ||||||| |||||| |||||||| ||||| || | | ||| Sbjct 9313 CCAGGTCCTATCCTCCTCCACCCTCTCCATGAACAGGTCGGGAATCCATAGTCCATAGAA 9372 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 ||| |||| || || | ||| ||| || |||||||| ||| |||| | ||||| Sbjct 9373 GAGATCCCGGGCCCGCGCCTCCTCCTTTCCGTGGTTCTTCCGCAGGTCCAGCACTTCAAA 9432 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 || ||| ||||||| ||||||| ||||| || | ||| || |||| |||| || || Sbjct 9433 GATGTCCGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCCCCTGGCCTCTTGCCTCCCCC 9492 Query 245164 CTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGA 245223 ||||||||| | | | ||| ||||| | || | ||||| | ||||| Sbjct 9493 CTGGTCCACGTAGCGCGCCGTGACGTCGAAGACCCTGAGCATGGGCACCAGACCGTTGCT 9552 Query 245224 GTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCC 245283 || || |||||||| ||||||||||| | | | || |||| || || | ||| Sbjct 9553 CGTCCCCTTCGTGCCCTTAATGTAGGCGCCGTGCGCGCGGATGTTGTGGACCGAGAGGCC 9612 Query 245284 TAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTC 245343 | ||| || || |||| || | |||||| ||| | ||||| || || | Sbjct 9613 GATTCCCCCCGCCGCCTTGCTTATCACGGCGCACTGCTTCAGCGTGTCGTAGATACCAAC 9672 Query 245344 CATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCA 245403 || ||||| | |||| || || ||||| ||||||| ||| || | ||| Sbjct 9673 GATCGAGTCCGCTTGCATGGCCAGGAGGAAGCACGAGGACATCTGCGGGAAACGCGTGCC 9732 Query 245404 CGAGTTGAACAGAGTGGGGCTGGCGTGG 245431 || || ||| ||||| ||| ||||||| Sbjct 9733 CGCGTGGAAAAGAGTAGGGGAGGCGTGG 9760 Score = 113 bits (124), Expect = 9e-20 Identities = 343/522 (66%), Gaps = 16/522 (3%) Strand=Plus/Plus Query 244074 CCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGA 244133 |||| | |||||| ||| ||||| |||||||| | | ||| || || ||| | Sbjct 8337 CCTCCAAGAGGTGCGGGTTGACCACAATGAACTCTCCTGCCTTCACTCGCCGTGCGTACA 8396 Query 244134 GGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAG 244193 ||| | || || ||||||| ||| ||| || || ||||| |||||| || | Sbjct 8397 AGTTCGAGGTGTAGGGTTCGATGCACTCATTGTACCCAAGGATCTGGGCCGTGGAGGCGG 8456 Query 244194 TCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGA 244253 | ||||| |||| || ||||| || | || ||||||| | | | | ||| Sbjct 8457 TGGGCATAGGCGCCAAAAGCAGGGAATTGCGCAGGCCGTGC-TGGGCAATCTCTTTCTTT 8515 Query 244254 GCTCGTTCC-AGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAAC 244312 | | || |||||||| ||| | | | | ||| |||||| | ||| || Sbjct 8516 AAACCTGCCCAGTCCCACCGGCC------GCTTTGGGGAGTGACGCCCCAGAGGTCGAAT 8569 Query 244313 TGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGG 244372 |||| | ||| | ||| |||| ||| ||| | | |||||| || || || | Sbjct 8570 TGCAACTTCCCTTGACTGGCGGGAGACCCCGGGTACGACTCGTAGGGGCCTTCTTTCTTG 8629 Query 244373 GCCAGCT---TACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTG 244429 || |||| | || ||| |||| ||||| |||| |||||||| ||||| ||||| Sbjct 8630 GCAAGCTCCATGGAGGCCTCA--GAGG-CGGCGAAGTACATGGTCTCAAAGATT-TCTTG 8685 Query 244430 -TTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGC 244488 ||| | | ||||||| | || ||| |||| || | | | |||||| |||||| Sbjct 8686 GTTCGTTTGCCGGGCCTCGGGAGAGTCGAAAGGGAGGCGAAGCTTGATGAAGGTGTCGGC 8745 Query 244489 CAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGG 244548 ||| ||||||||||| | ||| ||||| | ||| | | ||| ||| || || || Sbjct 8746 CAGGCCCTGCACGCCCAAGCCAATGGGCCGGTGCCTCCGATTGCTCCGCTCTGCCTCCGG 8805 Query 244549 CACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCG 244590 ||| ||||| | ||| | |||||| |||||||| || ||||| Sbjct 8806 CACTGGGTACAGGTTCCTGTCGATGACCTTGTTCAGATTGCG 8847 >seq4979 Length=17524 Score = 100 bits (110), Expect = 5e-16 Identities = 190/277 (69%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 42501 GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTAC 42560 ||||| || ||||||||||| ||||| || ||||| || || | ||| ||||||||| Sbjct 10238 GAGGCTCGATGCTTCTACGGTTTCCAAATCGCCATCGAAAATATTCACAGTGAGGTGTAT 10179 Query 42561 GCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCC 42620 || || | |||| |||||| | | || |||| || ||| || || ||| Sbjct 10178 TCCCTCCTTATTGACACTTACATCAAGAACCCATCCGAGAAACACAAGCTCTTAAACGCC 10119 Query 42621 ATGGAGACGATGCCCTGCATCAAGAAG-AAGGCGGACTGGGCGCTCAACTGGATCGAGAG 42679 || ||||| | || || || || | |||||| ||||||||| ||| ||| | Sbjct 10118 ATTGAGACCGTCCCTTGTGTCC-GACGCAAGGCGCGTTGGGCGCTCCGGTGGTGCGACCG 10060 Query 42680 TCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTT 42739 |||| | || | |||| | || | |||||| | ||||| ||||||||||| || Sbjct 10059 CAAGTACGCGTCTTTTGCCGAGCGCTTGATCGCCTTTGCAGCCGTGGAGGGCATCTTTTT 10000 Query 42740 CTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 ||| ||| ||||| ||| || |||||| | ||| || Sbjct 9999 CTCCGGCTCCTTCTGCTCGATTTTCTGGTTGAAGAAG 9963 >seq5823 Length=45548 Score = 95.1 bits (104), Expect = 2e-14 Identities = 236/349 (68%), Gaps = 12/349 (3%) Strand=Plus/Plus Query 242838 CGGGGCGCCCTGATCATCCTGGAAGGCGTCGATCGTTCGGGTAAGTCGACGCAGTGTCGC 242897 || || ||| | || |||| |||||||| ||||||| ||||| | || || || || Sbjct 8014 CGAGGAGCCTTTATTGTCCTTGAAGGCGTAGATCGTTGTGGTAAAACAACACAA-GTTGC 8072 Query 242898 ATGC-TGGTCAAGGCCCTGC-TGGAGATGGGAGTCGAGGCCGAGCTGATGAGGTTCCCGG 242955 | | || || ||| ||| || | ||| | || ||| || ||| | || || | Sbjct 8073 TCGGGTCGTTAAAGCCTTGCATGCTCAAGGGCG-CGCGGCAGAAGCGATTCGTTTTCCAG 8131 Query 242956 ACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAACAAGAGCGATCTGG 243015 | | |||||| | ||||| || ||||| ||| | ||||| ||| | ||| |||| Sbjct 8132 ATCGCACCACTACCATCGGTCAAATGATAAACGCCTACCTCGCCAATGCCACCGACCTGG 8191 Query 243016 ACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAAGCC---GCCTC-CGAC 243071 |||| | |||| | ||||| || ||||| ||||| |||||||||||| ||||| | || Sbjct 8192 ACGACCGCGTCATTCACCTTCTTTTCTCTGCCAATCGATGGGAAGCCATGGCCTCGCTAC 8251 Query 243072 CTGAAGCGCAAGCTGATGAAGGGTACCACCATCGTGCTCGACCGCTACGCGTTCTCCGGC 243131 | | ||||||| ||| | ||| | || ||||||||| || | || Sbjct 8252 --GCA--GCAAGCTTGCCGCGGGAATGACCTTGGTCTGCGACCGCTATGCATATAGTGGG 8307 Query 243132 GTAGCCTTCACGGCGGCGAAGCCCGGGTTCGAGCTCGAGTGGTGTAAGC 243180 || |||||| |||| || ||| ||| | || |||| |||||||||| Sbjct 8308 GTGGCCTTCTCGGCCGCCAAGGATGGGATGGATTTCGACTGGTGTAAGC 8356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944258222913600