Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F001614215.1_202016-04-
08] 6,860 sequences; 25,618,953 total letters
Query= NC_014467.1
Length=176788
Score E
Sequences producing significant alignments: (Bits) Value
seq5823 89.7 6e-13
>seq5823
Length=45548
Score = 89.7 bits (98), Expect = 6e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 40035 AAAGAAAAACCAGACGATCGCGGGATCATCGTTTCCGCCTGGAACCCTGTTGATCTTGAT 40094
|| || || ||||| |||||| | ||||| || || ||||||||||| | ||| | |
Sbjct 5932 AAGGACAACCCAGAGGATCGCCGCATCATTGTATCGGCCTGGAACCCCGCGGATTTGGGA 5873
Query 40095 GATATGGCTTTGCGTCCGTGTCAC-TGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACT 40153
| ||||| ||| ||||||||| ||||| | ||| ||| ||| |||| | ||
Sbjct 5872 AAGATGGCCCTGCCGCCGTGTCACATGTTT-TGCCAATTCTACGTCGCAGACGGAGAGCT 5814
Query 40154 GTCTCTACAGTGGTATCAGCGTTCAGTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGC 40213
||| ||| |||||||||||| | || | || || ||||||||||||| ||
Sbjct 5813 CTCTTGTCAGATGTATCAGCGTTCCGCAGACATGGGGTTGGGTGTGCCGTTCAATATTGC 5754
Query 40214 CTCCTACGCTCTCCTGAC 40231
||| ||||| ||| ||||
Sbjct 5753 CTCTTACGCACTCTTGAC 5736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565545100348800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |