Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F001614215.1_202016-04- 08] 6,860 sequences; 25,618,953 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq2348 84.2 3e-11 >seq2348 Length=90098 Score = 84.2 bits (92), Expect = 3e-11 Identities = 78/96 (81%), Gaps = 6/96 (6%) Strand=Plus/Plus Query 127513 TTTGGAGAGTTGGCAGAGTTTGGTTTATTGCACCTGACTTGAAATCAGACGATCCCCTAA 127572 || |||||| ||||||||| ||| ||||| |||||||||||||||| || | || Sbjct 60215 TTAGGAGAGATGGCAGAGT--GGTCGATTGCGTCTGACTTGAAATCAGAAGAAC---TAG 60269 Query 127573 AAAGGGT-CCGTGGGTTCGAATCCCACACTCTCCTC 127607 ||| ||| ||||||||||||||||||| ||||| || Sbjct 60270 AAATGGTTCCGTGGGTTCGAATCCCACTCTCTCTTC 60305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582686030388000