Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F001614215.1_202016-04- 08] 6,860 sequences; 25,618,953 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq6464 82.4 5e-11 >seq6464 Length=44462 Score = 82.4 bits (90), Expect = 5e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||||||||| ||||| ||||| || || || ||| | || || || ||| Sbjct 38587 ATGCAAATTTTCGTTAAGACCCTGACGGGCAAGACCATTACTTTGGACGTGGAGCCCAGC 38528 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || ||||| || ||||| || || | || || ||||| Sbjct 38527 GACACCATTGAGAATGTGAAGCAAAAGATCCAGGACAAGGAGGGGATCCCCCCTGATCAG 38468 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA 23765 ||||| | || ||||||||||| || || || || Sbjct 38467 CAGCGCCTCATTTTTGCCGGCAAGCAGCTCGAGGA 38433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337981340284880