Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20limnetica_20[genbank_20GCA_5F001614225.1_202016- 04-08] 23,791 sequences; 33,508,916 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq41 1368 0.0 seq566 619 2e-172 seq288 390 1e-103 seq620 181 1e-40 seq557 178 2e-39 seq49 104 3e-17 seq556 91.5 2e-13 >seq41 Length=4132 Score = 1368 bits (1516), Expect = 0.0 Identities = 2442/3530 (69%), Gaps = 146/3530 (4%) Strand=Plus/Plus Query 183587 GATTTCCTCACCTTTAAAGGTGGTTTGAATCCTGTAACTGGCAGTCTTTGGATGACAGAT 183646 ||||| || || ||||||||||| | ||||||||||| || | | ||| | |||||| Sbjct 636 GATTTTCTAACATTTAAAGGTGGACTAAATCCTGTAACAGGTGGATTATGGTTAACAGAT 695 Query 183647 ATAGCACATCATCACCTAGCAATAGCAGTTATGTTTATCATTGCAGGTCATATGTATCGC 183706 | || |||||||| |||| || || || |||| ||| |||| || || ||||| Sbjct 696 ACTGCGCATCATCATTTAGCTATTGCTGTGTTGTTCATCGTTGCTGGACACATGTACAAA 755 Query 183707 ACAAACTGGGGTATTGGTCAATCAATGAAAGAGATATTAGATGGTCAGAATGGTT-TCCC 183765 || |||||| | || || |||||| || | || | || || ||| | Sbjct 756 ACTAACTGGTTCTTAGGACATAGTATGAAAACTATTCTTGAAGCGCATAAAGGTCCTTTT 815 Query 183766 ACAGGGTGTCACACACAGAGGATTATATGAATTTCTAGCAGAATCAAGACATGCACAACT 183825 || || || |||| ||| ||||||||| || || || ||| | || |||||| | Sbjct 816 ACTGG-TGAAGGCCACAAAGGTTTATATGAAGTTTTAACAACATCTTGGCACGCACAATT 874 Query 183826 ATCACTGAATCTGGCAATGCTAGGATCTATCAGTATCATAGTTTCACATCATATGTATGC 183885 | | | || | ||| | | || || | ||||| || ||| | |||||||||||||| Sbjct 875 AGCTATTAACTTAGCATTATTTGGTTCGTTAAGTATTATTGTTGCTCATCATATGTATGC 934 Query 183886 AATGCCACCTTATCCATATCTTGGTATTGAATATCCAACAGTAGTAGGATTATTCACCCA 183945 |||||||| ||||| ||| ||| ||||| || |||||| | || |||||| || || Sbjct 935 GATGCCACCGTATCCGTATATTGCGATTGACTACCCAACACAATTATCATTATTTACACA 994 Query 183946 TCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCTTCAAT-TGCTA 184004 ||| ||||||| ||||| || |||||| |||| | || |||| | |||| | || Sbjct 995 CCATGTGTGGATTGGTGGATTCTGTATTGTTGGTGGTGCTGCTCATGGTGCAATCTTCTT 1054 Query 184005 TGATAAGAGACTATAATCCTGTTCAACATATGGGA-AATGTATTAGATAGAATACTTAAA 184063 || ||||||| || ||| | | |||| | | || | ||||| | || || Sbjct 1055 TG-TAAGAGATTACAATGCAGCA-AACAATTACAATAACCTTATAGATCGTGTAATTCGT 1112 Query 184064 TCTAGAGATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTTAGGTTTTCATAGT 184123 |||||| || || || ||| | ||||||||||| || || |||| | ||| Sbjct 1113 CATAGAGACGCTATTATTTCCCACCTTAACTGGGTATGTATTTTCCTAGGATGCCATTCA 1172 Query 184124 TTTGGTCTTTATATTCACAATGATATTATGAGAGCATTGGGTAGACCTAATGATCTATTC 184183 || || || ||| | ||||| |||| ||| | || || |||||| | | |||||||| Sbjct 1173 TTCGGACTGTATGTACACAACGATACAATGCGTGCGTTAGGTAGATCACAAGATCTATTT 1232 Query 184184 AGTGATACAGCAATACAATTACAACCTGTATTTGCACAGTCTGTTCAGAGATTACATGCT 184243 |||| ||||| |||| ||||| | ||||| || | | |||| | ||||| | Sbjct 1233 TCAGATAATGCAATTGCATTAAAACCTATCTTTGCTCAATTTATTCAAAATTTACACACG 1292 Query 184244 TCATTA--------TA-------TAATGTCT------CTG------ATGTATTTGGTGGA 184276 | | | || ||||| | ||| ||| |||||||||| Sbjct 1293 TTAGCACCAGGTAGTACTGCTCCTAATGCTTTGACAACTGTAAGTTATGCATTTGGTGGA 1352 Query 184277 TCAACCACAATGGTTGGTGGTAAGATTGCTAATGCT-CCTTTTGTACTAGGTACAGCAGA 184335 | | ||||| || || |||| || | ||| || |||| ||||| || Sbjct 1353 GATGTTATTAGTGTTGGATCAAAAATCGCTA-TGATGCCTATTAGTTTAGGAACAGCTGA 1411 Query 184336 CTTTATGATACATCACATACACGC-TTTCCAGATTCATGTTTGTGTATTAATTCTTCTCA 184394 || | | |||||||| || || ||| || ||||||||| || |||||| | | | Sbjct 1412 TTTCTTAGTTCATCACATTCATGCATTTACA-ATTCATGTTACCGTTTTAATTTTATTAA 1470 Query 184395 AGGGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGTAAGTTAGGATTCA 184454 | |||||| | ||||| |||||||| | ||||| |||||||| || ||||||| | Sbjct 1471 AAGGTGTTCTTTACTCAAGAAACTCTCGTTTAATTCCAGATAAAGCGAATCTAGGATTTA 1530 Query 184455 GATTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAGGATGGGATCATG 184514 |||||||||||||||| || || | || || |||||||| || || | |||||| |||| Sbjct 1531 GATTCCCTTGTGATGGACCAGGACGTGGCGGTACTTGTCAAGTTTCTGCATGGGACCATG 1590 Query 184515 TATTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAATCTTCCACTTTAGTT 184574 |||||||||| ||||||||||||||||| | ||||| || || || ||||||||||||| Sbjct 1591 TATTCCTTGGATTATTCTGGATGTATAACTCGATCTCGATCGTTATTTTCCACTTTAGTT 1650 Query 184575 GGAGAATGCAA---GATGTATGGGGTC----------------------------TAT-- 184601 ||| ||||||| ||||| |||||| ||| Sbjct 1651 GGAAAATGCAATCAGATGTTTGGGGTACAGTATCACCTACAGGAGCGGTATCACATATTA 1710 Query 184602 CAGGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGACTTCTTAT 184661 |||| ||||| ||||| || ||||| || ||||| ||||| ||| | ||||| ||||||| Sbjct 1711 CAGGTGGTAATTTTGCGCAAAGTTCTATCACAATTAATGGTTGGCTAAGAGATTTCTTAT 1770 Query 184662 GGTCACAGTCAAGTCAAGTTCT-CAATAGTTATGGA-CAAGACAT-CAGCATGTATGGTT 184718 ||||||| || ||||| | |||| ||||||| || || | | |||| |||||| Sbjct 1771 GGTCACAAGCAGCACAAGTGGTTCAATC-TTATGGATCATCACTTTCTGCAT--ATGGTT 1827 Query 184719 TGCTATTTCTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTATGGAGTGGTA 184778 | |||| | || || || || | |||||||||||||| |||||||||| ||||| Sbjct 1828 TAATATTCTTAGGTGCTCACTTCATTTGGGCATTCAGTTTAATGTTCCTATTTAGTGGAC 1887 Query 184779 GAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAATTAAAACTTG 184838 | ||||||||||||||| | || || || |||| |||||| ||||| ||||||||| ||| Sbjct 1888 GTGGATACTGGCAAGAGCTTATTGAATCAATTGTTTGGGCTCATAATAAATTAAAAGTTG 1947 Query 184839 CACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTTGGAGTTGCAC 184898 |||| | ||||||||| | || | ||||| ||||| |||||||| |||||||| | Sbjct 1948 CACCATCAATTCAACCACGTGCCTTAAGTATTACTCAAGGTCGTGCTGTAGGAGTTGCGC 2007 Query 184899 ACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGCTCACCTTATCCCCT 184958 | | ||| | || ||||||| ||||| |||||||||||| | || | || | Sbjct 2008 ATTATTTATTAGGTGGTATTGGTACAACTTGGGCATTCTTCCTAGCAAGAATCATTTCTG 2067 Query 184959 TAAGTTAAATC-----ATGGCTACTAAA-ACA--------AAATTTCCAAAATTTAATCA 185004 || | ||| || | || | ||| ||| ||||||||||| |||| | | Sbjct 2068 TAGGCTAA-TCTAGAAAAGGAGAAAAAATACATGGTATATAAATTTCCAAAGTTTAGTAA 2126 Query 185005 AGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGGATTAGCAACTGCACATGA 185064 || | || ||||| |||| || | | |||||||| | || || || ||||| Sbjct 2127 AGCACTAGCTGAAGATCCCTCAACAAGACGTATTTGGTATGGTATTGCTACAGCCCATGA 2186 Query 185065 CTTTGAGAGTCATGACAATATGACAGAAGAGAAGTTATATCAAAAATTATTTGCTACACA 185124 ||| || |||||||| |||||||||| || ||||||||||| | ||||| |||| Sbjct 2187 CTTCGAAAGTCATGATGCTATGACAGAATCAAAACTATATCAAAAAATCTTTGCATCACA 2246 Query 185125 CTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAATTTAATTCATATAGCATG 185184 || |||||| |||| || || || ||||| ||||| |||||| | || | || || Sbjct 2247 TTTCGGTCATATTGCCATCATTTTCTTATGGACAGCAGGGAATTTATTCCACGTTGCTTG 2306 Query 185185 GCAAGGTAACTTTGAA-CA--GTTTGTAGCAGACCCACAACATGTGATACCTATAGCACA 185241 |||||||||||||||| || | || | | |||| | || | ||| || ||||| Sbjct 2307 GCAAGGTAACTTTGAAGCATGGATTCTTA---ATCCACTTAAAGTTAGACCAATTGCACA 2363 Query 185242 TAGAATATGGGATCCTCATTTTGGTCAAGGTGCA-ACAGATGCATACACACAGGCAGGTT 185300 | ||| ||||||||||||||||| |||| ||| ||| | || | | | | | || Sbjct 2364 TGCAATTTGGGATCCTCATTTTGGACAAGCTGCTTACAAA-GCTTTCTTAAAAAC---TT 2419 Query 185301 CTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTGGTGGTACACAGTTGGTA 185360 | | |||| ||| | | || || | ||| | ||||||||||| |||||| Sbjct 2420 CAAGC---CCTGCTAACTTAGCATTATCAGGTGTTTATGAATGGTGGTACACTATTGGTA 2476 Query 185361 TGAGAACTAATATGCAACTGTATACTGG-TGGTGCATTTATGATTCTACTAGCATTGGTA 185419 |||||||||| | | || ||| || | | | | | | || || || || || Sbjct 2477 TGAGAACTAACAATGACCTTTATCAAGGATCATTCTTCT-TAATCTTATTATCAAGTTTA 2535 Query 185420 TCTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACCTAAGCTT-GCTTGGTT 185478 | ||| ||| || | ||||||||| |||| ||| ||| |||||| | |||||| Sbjct 2536 TTATTATTTGCTGGTTGGTTACATCTGCAACCTTCTTTTAGACC-AAGCTTAGATTGGTT 2594 Query 185479 TAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTATTTGGATTCAGTTCTAT 185538 ||||| |||||| | ||||||||||| |||||||| | ||||||| | ||||| | Sbjct 2595 TAAAGCAAATGAGTATAGATTAAATCACCATCTATCTGGATTATTTGGTGTTAGTTCATT 2654 Query 185539 TGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCATCAAGAGGAATCACTGTAGA 185598 || ||| |||| || || | || |||||||| |||| ||||||||| || ||| | Sbjct 2655 AGCTTGGACTGGCCACTTAGTTCATGTAGCAATTCCTGAATCAAGAGGCATACATGTTGG 2714 Query 185599 TTGGACTAATTATGTGTTTA---TGAAACCTCATCCTGCAGGTTTACTGCCATTCTTTAC 185655 |||| ||||| | || | | ||| || || | |||| || || ||||| | Sbjct 2715 TTGGGATAATT---TCTTAACAGTTTTACCACACCCAGAAGGTCTAACACCTTTCTTCTC 2771 Query 185656 AGGAAACTGGGGTGTTTATGCACAAAATCCTGATG--GATTAAATCAAATATTCAATACA 185713 || |||||| | || || |||| ||| ||| | || || || || | | Sbjct 2772 TGGTAACTGGAAAGCATACGCTCAAAGTCCGGATACTGCTTCG--CATATCTTTGGTTCT 2829 Query 185714 ACAGAGGGTTCTGGAACAGCAATATTAACATTCATGGGTGGTTTCCATCCACAAACAGAG 185773 || ||||| || || ||||| ||||||||| | |||||||||||||| ||||| | Sbjct 2830 GGCGAAGGTTCAGGTACTGCAATTTTAACATTCCTTGGTGGTTTCCATCCTCAAACGAAA 2889 Query 185774 GCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGGAGTAATATTCATTATT 185833 |||||||||| |||||||| || || || || | ||||| | || |||| || || Sbjct 2890 TCATTATGGTTAACTGATATGGCTCACCACCATTTAGCAATTGCTGTTCTATTTATCGTT 2949 Query 185834 GCAGGTCATATGTATAGAAGTGCTTGGGGTATTGGTCACTCAATGAAGGAGATACTTGAA 185893 ||||| ||||||||||||| | ||| || || || |||||| || | || Sbjct 2950 GCAGGACATATGTATAGAACTAACTGGTTAATAGGCCATCAAATGAAATTAATTTTAGAG 3009 Query 185894 GCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCATAAAGGATTATATGAAACAGTT 185953 || || || || |||| |||| || ||||| | || | |||||||| || Sbjct 3010 GCTCACCGTCCCCCTGGAGGTAGACTTGGAATTGGTCACATTGGTCTTTATGAAACTATT 3069 Query 185954 ACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCTAGGTGTTGTTACTAGT 186013 ||| |||| ||||| | || |||||| | |||||||| | ||||||| | || | Sbjct 3070 ACAAACTCTTTACATTTCCAATTAGGTTTAGCACTTGCGGCATTAGGTGTAGCAACATCT 3129 Query 186014 CTGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCATAGCACAGGCGCATA-- 186071 | |||||||| ||||| | | || | ||||| ||| ||||| | || Sbjct 3130 TTAACTGCACAACACATGTATGCTTTACCTCCTTATGCATTCTTAGCAT---CTAATTTC 3186 Query 186072 -CTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCAACTGCTCTGATGGTTGGT 186130 | || ||||| ||| ||||| ||||||||||| |||||| | || ||||||||| Sbjct 3187 CCAACTCAAGCAGCTTTATATACACATCATCAATATATTGCAGGTTTCCTTATGGTTGGT 3246 Query 186131 GCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCT-------ACTCTGAA 186183 || ||||| |||||||| || || ||||| ||||| | ||||| || || | Sbjct 3247 GCGTTTGCACATGGAGCGATCTTCTTTGTAAGAGATTACGATCCAGCAGTAAACACTAGA 3306 Query 186184 TAAGG-----ACAATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTCAC 186238 | || | ||||| |||| | ||||| || | ||||||||||| ||||| |||| Sbjct 3307 AATGGTGAAAAAAATGTACTTGCTCGAATGTTAGAACACAAAGAAGCTATTATTTCTCAC 3366 Query 186239 TTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATGAT 186298 |||||||||||| ||||| | || ||||| |||||||| || || || || ||||| Sbjct 3367 TTAAGTTGGGTAAGTTTATTCTTAGGTTTCCACACTTTAGGGATTTACGTACACAATGAC 3426 Query 186299 GTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCACAG 186358 |||||| | || |||||||| || |||| ||| || | |||||||| ||||||| | Sbjct 3427 GTAGTAGTAGCTTTTGGTCAACCAGAGAAACAAATTCTTGTTGAACCTTTATTTGCGGAA 3486 Query 186359 TGGATACAGGCAGCATCAGGTAAGATGATGTATGGATTAAGTTTCTTACTATCTGATCCA 186418 ||||| || || |||||||| || | | || || ||| ||| || || || | Sbjct 3487 TGGATTCAAGCGGCATCAGGAAAAACATTATACAACTTTGATTTATTATTAGCT--TCAA 3544 Query 186419 --AATAGTGCTGCAAGTCTAGC-AGCAGAGAGTATGCCTGGTAATCATTACTGGATGAGT 186475 | |||| | || ||| |||| || || | | |||| | || |||| | ||| Sbjct 3545 GTACTAGTTCAGCTAGTGTAGCTAGTAGTCAACTT---TGGTTACCAGG-CTGGTTAAGT 3600 Query 186476 GCTATGAATGATCAAACAAACAGTCTGTTTCTACCAATAGGACCTGCTGATTTATTAGTT 186535 || || |||||| | |||| | || ||||||| || |||| ||||| |||||| Sbjct 3601 GCAATTAATGATGGTAAAAACTCATTATTCTTACCAATTGGTCCTGGAGATTTCTTAGTT 3660 Query 186536 CATCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTCAAGGGTGCATTA 186595 |||||||||||||| | || | ||||| ||||| ||||| || || || ||||||||| Sbjct 3661 CATCATGCTATTGCTTTAGGTCTTCATACAACAACATTAATTCTTGTAAAAGGTGCATTA 3720 Query 186596 GATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATATTCATTCCCTTGT 186655 ||||| | || |||||| | || |||||||| |||||||| || ||| ||||||||| Sbjct 3721 GATGCACGTGGATCAAAATTAATGCCAGATAAAAAAGATTTTGGTTATAGTTTCCCTTGT 3780 Query 186656 GATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTTTCTATCTCTCT 186715 ||||| ||||| | |||||||||||||||| ||||| |||||||||||||||||| || Sbjct 3781 GATGGACCAGGACGTGGTGGTACTTGTGATATTTCTGCTTGGGATGCTTTCTATCTTGCT 3840 Query 186716 GTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCACTGGAAGAACCTT 186775 |||||||| || || ||||| | |||| || || ||||| ||||| | | Sbjct 3841 ATGTTCTGGATGTTAAACACAATTGGGTGGGTTACATTCTACTGGCATTGGAAACATTTA 3900 Query 186776 GCTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAACATATCTTATGGGTTGG 186835 || |||||||||||||||| ||||| ||| ||| || ||| | ||||||||| Sbjct 3901 ACTTTATGGCAAGGTAATCAGGTTCAATTTAATGAATCTTCAAACTATATCATGGGTTGG 3960 Query 186836 TTCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCACAGGGTACACACCATTTGGT 186895 || ||||||||| | ||| || | || |||| | || |||| ||||||||| Sbjct 3961 TTAAGAGATTATTTATGGCTTAACTCATCTCCATTAATTAATGGTTACAATCCATTTGGT 4020 Query 186896 ATGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTTAGTTTGGGCAACA 186955 ||||| ||| || |||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct 4021 ATGAACTCTCTTTCAGTATGGGCTTGGATGTTCTTGTTTGGCCATTTAGTATGGGCAACA 4080 Query 186956 GGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAATTGA 187005 || || |||||||| ||||||||||||||||||||||| || || ||||| Sbjct 4081 GGTTTCATGTTCCTAATTTCTTGGAGAGGTTATTGGCAGGAATTGATTGA 4130 Score = 145 bits (160), Expect = 1e-29 Identities = 312/459 (68%), Gaps = 18/459 (4%) Strand=Plus/Plus Query 182939 TCAAGAAAAATATTTGCTGCACACTTTGCTCATCTAGGTATCATCTTTGTATGGATGAGC 182998 ||||||||||| || ||| ||||||| || |||| | | || || | ||| | || Sbjct 24 TCAAGAAAAATCTTCAGTGCTCACTTTGGACAACTAGCTGTAATATTCCTTTGGTTAAGT 83 Query 182999 AGTTTCTTCTTTCAAGGTGCTAGGTTTTCAAACTATACAGGATGGTTGGCAGACCCAAC- 183057 || | ||| || ||||| ||||| |||||| ||| |||||| | ||||||| Sbjct 84 GGTATGCACTTCCATGGTGCGTATTTTTCTAACTATTCAGCATGGTTAACTAACCCAACA 143 Query 183058 TCATGTAAAACCTGGTGCTCAAGTGGTTTGGCCTATACTTGGTCAAGAGATATTGAATGG 183117 ||| |||||| |||||||| | || |||||||| | || ||||| || | |||| Sbjct 144 TCA-ACAAAACCGAGTGCTCAAATCGTATGGCCTATCGTAGGACAAGAAGTACTAAATGC 202 Query 183118 AGATCAGGGTGCAGGATATCAAGGTATTAGAATTACATCTGGTTTATTTCAGATGTGGAG 183177 ||| |||| | | ||||||||| |||||| ||||| || || || | ||| | Sbjct 203 AGACGTTGGTGGAAATTTCCAAGGTATTCAAATTACTTCTGGCTTTTTCCAATTATGGCG 262 Query 183178 AGCATGGGGTATAACAAATGAAACTCAAC-TAATGGCGCTAGCACTAGGTGCTTTAGTTA 183236 || ||||| || | |||| | ||| | || | | ||| | |||| ||||||| Sbjct 263 TGCTGAAGGTATCACTAGTGAAGTTGAACTTTATTG-GACAGCTGTTGGTGGTTTAGTT- 320 Query 183237 TGGCAGCAGTTATGTTTAATGCT-------GGTGCATTTCATTTTCACGTTGCTGCTCCT 183289 ||| | ||| ||||||||| ||| || |||| ||| ||||| || Sbjct 321 --GCATC-GTT---TTTAATGCTATTTGCAGGTTGGTTCCATTATCATAAAGCTGCACCA 374 Query 183290 AAGTTATCATGGTTTCAGAATGTAGAATCTATGATGAATCATCACCTTGCAGGTTTGCTT 183349 ||| | |||||| || |||| ||||||||| | || |||||| | || ||||| | Sbjct 375 AAGCTTGAATGGTTCCAAAATGCTGAATCTATGTTAAACCATCACTTAGCTGGTTTATTA 434 Query 183350 GGTCTTGGTTCTTTAGGATGGGCAGGACATTTAATTCAT 183388 ||| | ||||| ||| |||||||||||| ||| ||| Sbjct 435 GGTTTAGGTTCATTATCTTGGGCAGGACATCAAATCCAT 473 >seq566 Length=2184 Score = 619 bits (686), Expect = 2e-172 Identities = 768/1048 (73%), Gaps = 25/1048 (2%) Strand=Plus/Plus Query 190789 AGGTTGGTTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTG 190848 ||||| ||||| | | ||||||||||||||||| ||| | || ||||| || ||||| Sbjct 585 AGGTTTATTTGACTTAGTCGATGACTGGTTAAAACGAGATCGTTTCGTATTTATTGGTTG 644 Query 190849 GTCTGGTCTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAAC 190908 ||| || ||| ||||||| ||| || || || || ||||||| ||||| ||||| || Sbjct 645 GTCAGGCCTTTTATTATTCCCAACAGCATTTCTTGCAGTTGGTGGATGGTTAACAGGTAC 704 Query 190909 TACATTTGTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAA 190968 || |||||||| |||||||||||||||| | |||||||| ||||| |||||| || Sbjct 705 GACTTTTGTTACATCTTGGTATACACATGGATTAGCATCTTCTTACCTAGAAGGATGCAA 764 Query 190969 CTTTTTGACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTT 191028 ||| || || | ||| ||||| ||||||| | |||||||||| ||| | || || Sbjct 765 CTTCTTAACTGTAGCGGTATCAACACCTGCAAACAGTATGGGTCATTCCTTAATTTTATT 824 Query 191029 ATGGGGTCCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAA 191088 |||||| || || |||||||| || ||||||| | |||||||||||| | ||| Sbjct 825 ATGGGGACCTGAAGCACAAGGAGATTTCACTCGTTGGCTTCAAATTGGTGGATTATGGGC 884 Query 191089 CTTTGTAGCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAAT 191148 ||| | ||| | ||||||| ||||||| | || |||||| |||||||| || || || Sbjct 885 TTTTATCGCATTACATGGTGCATTTGGTTTAATTGGATTCTGTTTACGTCAATTCGAGAT 944 Query 191149 TGCAGGATTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGT 191208 || | | || |||||| | || || || || |||| || |||| || || || Sbjct 945 CGCTCGTCTTGTAGGTATTCGTCCATATAACGCAATTGCATTCTCTGGACCTATTGCGGT 1004 Query 191209 TTTCACAAGTGTATTCTTAATCTATCCACTTGGTC-AGCACAGTTGGTTCTTTGCACCTT 191267 ||| |||||||||||||||||| || || | |||| ||||||||||| || || Sbjct 1005 ATTCGTTTCTGTATTCTTAATCTATCCTCTAGGACAAGCA-AGTTGGTTCTTCGCTCCAA 1063 Query 191268 CATTTGGAGTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTA 191327 ||||| |||||||| || || | | | ||||| | ||||||||||| || | Sbjct 1064 GTTTTGGGGTTGCAGCTATTTTCCGCTTCTTATTATTCTTACAAGGTTTCCATAACTGGA 1123 Query 191328 CACTCAACCCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTG 191387 |||| ||||| ||||| |||||||| || ||||| ||| ||||||| |||||| ||| || Sbjct 1124 CACTTAACCCATTCCATATGATGGGCGTAGCAGGGATTTTAGGTGGTGCATTATTATCTG 1183 Query 191388 CCATTCATGGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATG 191447 | |||||||| ||||| ||| | ||||| | | ||| ||||| Sbjct 1184 CAATTCATGGAGCTACTGTAGAAAACACACTATTTGA------------------AGATG 1225 Query 191448 GTCAAGTTCAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATT 191507 || | | | || || || || | || ||| |||||||| || |||||||||| Sbjct 1226 GTGATGCTGCAA--AC-ACATTCCGTGCGTTTACACCAACACAATCAGAAGAAACTTATT 1282 Query 191508 CTATGATCACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAA 191567 | ||| | || || || ||||||||||| || || || ||| | || |||||||||||| Sbjct 1283 CAATGGTAACAGCGAATAGATTCTGGTCTCAAATTTTCGGTGTAGCTTTCTCTAACAAAC 1342 Query 191568 GATTTCTACACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAG 191627 | | || |||||||| ||||| |||||||| |||| || | |||||| || | | Sbjct 1343 GTTGGCTTCACTTCTTCATGTTATTTGTTCCAGTAACAGGTTTATGGACAAGTTCTTTTG 1402 Query 191628 GTATTGTAGGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAG 191687 ||||||||||| | ||| | || ||||||||||| || || ||||||||||| | | | Sbjct 1403 GTATTGTAGGTTTAGCATTAAATTTAAGAGCATACGACTTCGTATCTCAAGAACTTCGTG 1462 Query 191688 CAGCAGAAGACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTT-AATGAAGGT 191746 |||| ||||| ||||| |||||||| ||||| ||||| || | |||| || || |||||| Sbjct 1463 CAGCTGAAGATCCAGAATTTGAAACTTTCTACACTAAAAATA-TCTTATTAAACGAAGGT 1521 Query 191747 ATGAGAGCATGGATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAA 191806 || ||| |||||||| | || ||||||||| ||||| |||||||| ||||||||||| Sbjct 1522 ATTAGATCATGGATGGCCGCACAAGACCAACCACATGAAAACTTTGTATTCCCAGAGGAG 1581 Query 191807 GTTCTACCTAGAGGAAATGCATTGTAAT 191834 ||| |||| | ||||| || | |||| Sbjct 1582 GTTTTACCACGTGGAAACGCCCTTTAAT 1609 >seq288 Length=849 Score = 390 bits (432), Expect = 1e-103 Identities = 404/524 (77%), Gaps = 4/524 (1%) Strand=Plus/Plus Query 189707 GGTTGGTTTGGTGTACTCATGATTCCATGCTTGCTCGCAGCAGCAGCATGCTTCGTTGTT 189766 |||||||| ||||| | ||||| ||| || | |||| || |||||| | | Sbjct 327 GGTTGGTTCGGTGTTTTAATGATCCCAACATTATTAACAGCTACAAGCTGCTTCATCATC 386 Query 189767 GCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCA 189826 || ||||| || ||||| || || || || || || ||| | || |||||||| || ||| Sbjct 387 GCTTTTATCGCTGCACCTCCAGTTGATATCGACGGTATCCGTGAACCAGTTGCTGGATCA 446 Query 189827 CTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGT 189886 ||| | || || ||||||||||| ||||||| ||| | ||| || || |||| ||| Sbjct 447 CTTTTATACGGAAACAACATCATCACTGGTGCAGTTATTCCTAGTTCTAACTCTATCGGT 506 Query 189887 CTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTGGT 189946 | |||||||||||| | |||||||| || | |||| |||||||||||||| |||||| Sbjct 507 ATTCACTTCTACCCAGTTTGGGAAGCTGCGTCTTTAGACGAGTGGCTTTACAACGGTGGT 566 Query 189947 CCTTACCAGTTGGTAATCTTCCACTTCCTTATT-GGTATCTCAGCATACATGGGAAGACA 190005 |||||||| | ||| | || ||||| |||||| ||| | | ||||||||| | | Sbjct 567 CCTTACCAACTTGTAGTATTACACTT-CTTATTAGGTGTAGCTTGCTACATGGGACGTGA 625 Query 190006 GTGGGAA-TTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCAC 190064 |||||| ||| | ||| | |||| ||| | |||||||| | || |||| ||||| | Sbjct 626 ATGGGAACTTAGC-TACCGTTTAGGGATGCGTCCTTGGATTTTCGTAGCTTTCTCAGCTC 684 Query 190065 CAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTG 190124 ||||| ||||||||| |||||||||| | || |||||| | || || ||| ||||||| Sbjct 685 CAGTAGCTGCAGCATCTGCAGTATTCTTAGTTTACCCAATCGGACAAGGTAGCTTCTCTG 744 Query 190125 ATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAAC 190184 ||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||||| Sbjct 745 ATGGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCAGAAC 804 Query 190185 ATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGT 190228 | || || ||||||||||||||||||||||| ||||| || ||| Sbjct 805 ACAACATTCTTATGCACCCATTCCATATGGCTGGTGTTGCTGGT 848 >seq620 Length=282 Score = 181 bits (200), Expect = 1e-40 Identities = 212/285 (74%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 190231 GTTTGGTGGAGCATTATTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAG 190290 ||||||||| | |||||| ||| ||||| ||||| |||||||||||| | ||||| | Sbjct 1 GTTTGGTGGGTCTTTATTCAGTGCTATGCACGGTTCTCTTGTAACATCTAGTTTAATCCG 60 Query 190291 AGAAAC---AACTGGTTTAGAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 190347 ||||| | || || || ||||| |||||||| || |||||||||||||| Sbjct 61 TGAAACTGAAGACGGCGTA---TCTGCTAACTACGGTTACAAATTCGGACAAGAAGAAGA 117 Query 190348 AACATACAACATAGTAGCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTC 190407 ||| |||||||| |||||||| || ||||||||||| | | |||||||| || || Sbjct 118 AACTTACAACATCGTAGCTGCACACGGTTACTTTGGACGTTTAATCTTCCAATACGCGAG 177 Query 190408 ATTCAACAACTCAAGAAGTTTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATG 190467 ||||||||||| | |||||||||||||||||| | | || || || | || Sbjct 178 TTTCAACAACTCTCGTGCTTTACACTTCTTCTTAGCTGCTTGGCCAGTTGTAGGTATCTG 237 Query 190468 GTTAACATCAATGGGTATTTGCACAATGGCATTCAACTTAAATGG 190512 |||||| | | ||| || | || |||||||||||||||||||| Sbjct 238 GTTAACTGCTCTTGGTGTTAGTACTATGGCATTCAACTTAAATGG 282 >seq557 Length=446 Score = 178 bits (196), Expect = 2e-39 Identities = 187/246 (76%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 182486 ATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCT 182545 |||||||| | || ||||| ||||| || || ||||| ||||||||||| || ||| Sbjct 98 ATGTCTCATACAGTAAAAATTTATGACACGTGTATTGGTTGCACACAATGCGTACGTGCT 157 Query 182546 TGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCT 182605 || ||| ||||||||||||||||| ||||||||||| || |||||| || |||||| Sbjct 158 TGCCCAACAGATGTATTAGAAATGGTACCTTGGGATGGTTGTAAAGCAGGACAGATTGCT 217 Query 182606 TCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACA 182665 || | ||| | || || || ||||||||||| || | ||||||||||| || || || Sbjct 218 TCTGCTCCTCGTACAGAAGACTGTGTAGGATGCAAACGCTGTGAAACAGCTTGCCCAACG 277 Query 182666 GACTTTTTAAGTATTCGTGTTTACTTGGGTGCAGAAACCACAAGAAGCATGGGTCTAGCA 182725 || ||| ||||| | ||||| ||||| |||| ||||| || | || | ||| |||| Sbjct 278 GATTTTCTAAGTGTACGTGTCTACTTAGGTGGTGAAACGACTCGTAGTCTTGGTTTAGCT 337 Query 182726 TATTAA 182731 || ||| Sbjct 338 TACTAA 343 >seq49 Length=2147 Score = 104 bits (114), Expect = 3e-17 Identities = 120/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 190490 ACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAAGGT 190549 || ||||||||||||||||||||||||||||| ||||| || || |||||| ||||| Sbjct 2140 ACTATGGCATTCAACTTAAATGGTTTCAACTTCAACCAATCGGTTGTTGATAGCCAAGG- 2082 Query 190550 AAAATTGTTCCA-ACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAAT 190608 || || | || |||| || || | ||| | || | | |||||||||||||| Sbjct 2081 CCGCGTGATCAACACTTGGGCTGACATTATCAACCGTGCTGATTTAGGTATGGAAGTAAT 2022 Query 190609 GCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 190647 ||| ||| | || || ||||||||||| ||||| |||| Sbjct 2021 GCACGAACGTAACGCGCACAACTTCCCTCTAGATTTAGC 1983 >seq556 Length=2095 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 186998 TTAATTGAGACTCTTGCTTGGGCACATCAAAGAACTCCAATAGCAAATATAGCAGGTTGG 187057 || ||||| ||| | | |||||| ||| || | || || ||||||| | | | ||||| Sbjct 2 TTGATTGAAACTATCGTTTGGGCTCATGAACGTACACCGTTAGCAAACCTTGTACGTTGG 61 Query 187058 AGAGATAAACCAGTGGCACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACATTTT 187117 | ||| ||||| || ||| | || ||||||||||| ||||| ||||| ||| | ||||| Sbjct 62 AAAGACAAACCGGTAGCATTATCGATTGTTCAAGCTAGACTTGTTGGCTTAGCTCATTTC 121 Query 187118 GCCATAGGATTTGTGCTTACCTATGCACCATTCCTGATAGCAACAACAGCAAGTAGATAC 187177 | | || | ||| || || ||||| | || | || || ||||| | ||| || Sbjct 122 ACAGTTGGTTATGTACTAACATATGCGGCCTTTGTTATTGCTTCAACAATAGGTAAATTA 181 Query 187178 GGTTA 187182 ||||| Sbjct 182 GGTTA 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631239421443560