Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20oceanica_20[genbank_20GCA_5F000226695.1_202011-09- 29] 5,851 sequences; 27,639,860 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq159 89.7 4e-13 >seq159 Length=12779 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 ||||| || || | || ||| | || | || || || || ||||||||||| || Sbjct 10475 CCGCCTCGCAGGCGCAGAACCAGGTGCAATGTGGACTCCTTCTGAATGTTGTAGTCCGAA 10534 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || || || || || || || || ||||||| ||||| || || || || Sbjct 10535 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCAGGGGGG 10594 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| |||||||| || | | || | |||||| ||| || || Sbjct 10595 ATCCCTTCCTTGTCCTGGATCTTTTGCTTCACATTCTCGATTGTGTCGCTGGGCTCAACA 10654 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAA 114389 || | ||| | || ||||| ||||| || || || || |||||||||||| || Sbjct 10655 TCTAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATGGCTAAA 10708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420104440609812