Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20oceanica_20[genbank_20GCA_5F000226695.1_202011-09- 29] 5,851 sequences; 27,639,860 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq225 149 2e-30 >seq225 Length=49998 Score = 149 bits (164), Expect = 2e-30 Identities = 212/298 (71%), Gaps = 9/298 (3%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| ||||| || || || ||||| || ||| | || || ||||| || ||||| || Sbjct 35279 GCAGTTATTACAGTGCCTGCATATTTTAACGATTCTCAGCGACAAGCGACGAAAGACGCT 35338 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || | ||||| |||||| | ||| | || |||||||||||||| |||||||| || || Sbjct 35339 GGTAAGATTGCGGGTTTAGAAGTTTTACGTATTATTAATGAACCAACAGCAGCAGCACTT 35398 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 || ||||| ||| || ||||| || | ||| || ||| | |||||||| Sbjct 35399 GCTTATGGTTTAGACAA---AAAAGCAA------ATGAAACGATATTAATCTTTGATTTA 35449 Query 451502 GGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAG 451561 ||||| || || |||| ||| | | | ||| |||||| |||||||||||| Sbjct 35450 GGTGGTGGTACATTTGATGTTTCAATTTTAGAAGTTGGAGATGGTGTATTTGAAGTATTA 35509 Query 451562 GCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAAT 451619 ||||| |||||||| |||| |||| || || ||| |||| |||||| || ||| Sbjct 35510 GCAACTGCTGGTGATAGTCATTTAGGTGGAGATGATTTTGACTCTGCAATAATGAAAT 35567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975570288417908