Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20oceanica_20[genbank_20GCA_5F000226695.1_202011-09- 29] 5,851 sequences; 27,639,860 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4787 109 1e-18 >seq4787 Length=11161 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || | |||||| || || ||||||||||| || ||||| || || || || || Sbjct 6625 CCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATACCCTCC 6566 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| ||||| |||||||| |||||||| || ||||| || || || |||||| Sbjct 6565 TTGTCCTGAATCTTTTGCTTCACGTTCTCGATTGTGTCGCTGGGCTCGACATCGAGGGTA 6506 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||| || || ||||| | |||||| Sbjct 6505 ATGGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 6468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109398426671717