Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20oceanica_20[genbank_20GCA_5F000226695.1_202011-09- 29] 5,851 sequences; 27,639,860 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq4332 87.8 8e-13 >seq4332 Length=45634 Score = 87.8 bits (96), Expect = 8e-13 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 65090 GTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGA 65149 || |||||||| ||| |||| | | || |||||| || || || | |||||| ||| Sbjct 28350 GTACCAAACTGCCCACTTGGGAAGAGATAACCAATATTATTCGACCCCACAAAATTTTGA 28291 Query 65150 GCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCA 65209 |||||||| | ||| | | ||||| ||| || || || ||||| | ||||||||| Sbjct 28290 GCCATTCCTACAATCGTCCCGTTTAAGGACGCCTCCCCATGGTGATAGGCGGAATGTTCA 28231 Query 65210 GAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAA 65265 || ||||||||| | || || ||||| || ||| || | || || |||||| Sbjct 28230 GACACATATCCAGCGAGCTGCGCGACTTTGATCTCCTTTTTCAAGCTCCGTTTAAA 28175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235663193880150