Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq977 86.0 6e-12 >seq977 Length=24603 Score = 86.0 bits (94), Expect = 6e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||||||| || || ||||||| | | |||||| || || ||||||||||| || Sbjct 11070 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCTTCCTT 11011 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||||| |||||| | | | ||| | | || ||||| | || || Sbjct 11010 GTCCTGGATTTTCTGCTTGACATTGTCAATGCAGTCGGACGGCTCCACGTCCAAAGTAAT 10951 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 ||| || || || | ||| |||||||||||||||||| || Sbjct 10950 GGTCTTGCCTGTCAAAGTCTTCACAAAGATCTGCATGATT 10911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448268443617960