Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3454 87.8 1e-12 >seq3454 Length=44902 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || ||||| |||||||| || || |||||||| | || || |||| Sbjct 40 AGCACCAGGTGTAGCGTCGACTCCTTCTGGATATTGTAGTCCGACAGCGTACGACCGTCT 99 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || ||||| ||| | || || ||||| ||||| || | ||| || ||||| Sbjct 100 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCT 159 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | |||||||| | | | | | || | ||| |||| ||||| || Sbjct 160 TGAATCTTTTGCTTCACGTTGTCAATCGAATCAGACGATTCCACCTCCAGCGTGATCGTC 219 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || ||||| || ||||||||||||||||| ||| Sbjct 220 TTGCCCGTCAGTGTCTTGACAAAAATCTGCATCTTG 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405067950802390