Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq977 113 4e-20 >seq977 Length=24603 Score = 113 bits (124), Expect = 4e-20 Identities = 146/198 (74%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 24993 GGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 |||| ||||| || ||||| ||||||||||| || || |||| || | || |||||| Sbjct 10909 GGAATCATGCAGATCTTTGTGAAGACTTTGACAGGCAAGACCATTACTTTGGACGTGGAG 10968 Query 25053 TCGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110 |||| ||| || || || || ||||| |||||| ||||| ||||| ||||||| Sbjct 10969 CCGTCCGACTGCATTGA--CAATGTCAAGCAGAAAATCCAGGACAAGGAAGGTATTCCAC 11026 Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG--CACTGTGGG 25168 ||||||| || || | || ||||| ||||| || | ||||||| || |||| | | Sbjct 11027 CTGACCAGCAACGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGTACACTTTCG- 11085 Query 25169 CGATTACAATATTCAAAA 25186 || ||||||||||| || Sbjct 11086 -GACTACAATATTCAGAA 11102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433306553107715