Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3454 122 7e-23 >seq3454 Length=44902 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | |||| ||| || || || || || ||||| || Sbjct 22 ATACCACCACGCAGGCGGAGCACCAGGTGTAGCGTCGACTCCTTCTGGATATTGTAGTCC 81 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| ||||| || || || ||||| |||| |||||||| ||||| || Sbjct 82 GACAGCGTACGACCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGC 141 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||||||| || | | |||| | || | ||||| Sbjct 142 GGGATGCCTTCCTTGTCTTGAATCTTTTGCTTCACGTTGTCAATCGAATCAGACGATTCC 201 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| ||||| ||||| || || |||||||||||||| Sbjct 202 ACCTCCAGCGTGATCGTCTTGCCCGTCAGTGTCTTGACAAAAATCTGCAT 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420113606104332