Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3454 102 8e-17 >seq3454 Length=44902 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || || |||||||| || ||||| ||| || || || || || | | Sbjct 58 GACTCCTTCTGGATATTGTAGTCCGACAGCGTACGACCGTCTTCCAGCTGCTTGCCAGCA 117 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || || ||||| ||||| || ||||| || | Sbjct 118 AAGATCAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTGAATCTTTTGCTTCACG 177 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | | || | ||| |||||||| | ||| | ||| || || ||||| || || Sbjct 178 TTGTCAATCGAATCAGACGATTCCACCTCCAGCGTGATCGTCTTGCCCGTCAGTGTCTTG 237 Query 138601 ACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 238 ACAAAAATCTGCAT 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496237208479920