Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3454 143 3e-29 >seq3454 Length=44902 Score = 143 bits (158), Expect = 3e-29 Identities = 167/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTG 134554 || || | ||| ||||||||||| || ||||| || || ||||||| || || | || | Sbjct 34 AGGCGGAGCACCAGGTGTAGCGTCGACTCCTTCTGGATATTGTAGTCCGACAGC-GTACG 92 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | ||| || ||||| ||||| ||||| |||| ||||||||| || ||||| |||||||| Sbjct 93 ACCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGCGGGATGCCTTC 152 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || |||||||| ||||| || || ||| | | || ||||||||||| || || || Sbjct 153 CTTGTCTTGAATCTTTTGCTTCACGTTGTCAATCGAATCAGACGATTCCACCTCCAGCGT 212 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || || | || || || ||||| ||||| ||| Sbjct 213 GATCGTCTTGCCCGTCAGTGTCTTGACAAAAATCTGCATCTTG 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505372744713720