Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq162 372 9e-98 seq325 358 2e-93 seq3526 246 9e-60 seq3952 237 5e-57 seq3454 159 1e-33 seq3725 149 2e-30 seq977 132 1e-25 seq3780 109 2e-18 seq3543 91.5 4e-13 seq3923 89.7 2e-12 seq832 87.8 5e-12 seq219 84.2 7e-11 seq122 84.2 7e-11 >seq162 Length=3807 Score = 372 bits (412), Expect = 9e-98 Identities = 972/1471 (66%), Gaps = 16/1471 (1%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||| | ||||| || || || || || | ||| ||||| || || || ||||| Sbjct 1728 GGCATTGATCTCGGTACGACGTACTCGTGCGTCGGTGTGTGGCAGAACGACCGCGTAGAG 1787 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| || || ||||||||| | || ||||| || ||||| ||||| || || || Sbjct 1788 ATTATTGCTAACGACCAAGGTAACCGCACGACGCCGTCCTACGTGGCATTCACGGACACG 1847 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 |||||| | ||||||||| | || || || |||| ||| || || | || ||||| Sbjct 1848 GAGCGTCTTATTGGTGATGCCGCTAAGAACCAAGTGGCTATGAACGCACACAACACGGTG 1907 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAA-ATCTACACAATCTGATCT 349443 || || || ||||| || |||||| | | ||||| ||| ||| ||| |||| Sbjct 1908 TTCGACGCCAAGCGCCTCATTGGTCGCAAGTTTTCGGACCCGATCGTT-CAAGCTGACAC 1966 Query 349444 AAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGA 349503 || || | || |||| || | | |||||| || ||| ||| ||| | Sbjct 1967 GAAGCACTGGCCATTTAAAGTCACGTCTGGTGCCGGTGACAAGCCACAGATTACGGTGCA 2026 Query 349504 ATATAAAGGTGAA-CAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTA 349562 || || || || |||| || || || || || || || || ||||| | ||| Sbjct 2027 ATTCAAGGGCGAGTCAAAGACG-TTCCAGCCTGAGGAGATCTCGTCCATGGTCCTGATTA 2085 Query 349563 AAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTG 349622 | ||| || | || ||||| | | || | || | |||| || ||||| | Sbjct 2086 AGATGCGTGAGGTGGCGGAAGCTTTCATCGGCAAGGAGGTGAAGAATGCAGTGATTACGG 2145 Query 349623 TACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGG 349682 |||| |||||||| ||||| | |||||| || || || || || || |||||| | Sbjct 2146 TACCGGCCTATTTCAATGACTCGCAGCGTCAAGCCACCAAGGACGCCGGTGCCATTGCTG 2205 Query 349683 GGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTG 349742 | | ||||| || | || || || ||||| || ||||| || ||||| ||||| || | Sbjct 2206 GACTTAATGTGCTCCGTATTATCAACGAACCGACGGCTGCTGCTATTGCCTATGGTCTGG 2265 Query 349743 ATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTG 349802 | || | | | | ||| || | || || ||||| | || || ||||| |||| Sbjct 2266 ACAAGAAGGGCGGT---GAACGTAACGTGCTGATCTTTGACCTTGGCGGCGGTACCTTTG 2322 Query 349803 ATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATA 349862 | || || ||||| | |||||||||| |||||||| || ||||| || |||||||| | Sbjct 2323 ACGTGTCGCTACTGAGCATTGAAGAGGGCATTTTTGAGGTGAAAGCCACAGCTGGTGACA 2382 Query 349863 CACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTA 349922 | || | ||||| || || ||||| || ||||| || ||||| | || || | Sbjct 2383 CGCACTTGGGTGGTGAGGACTTTGACAACCGTCTGGTAGACCATTTCACCCAGGAGTTCA 2442 Query 349923 AGCGTCAAGCTAAA-ATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACT 349981 ||||| |||| | || ||| || || | | || | ||||| ||| | || Sbjct 2443 AGCGT-AAGCACCGCAAGGACATTACGGAGAACCAGCGTGCCCTCCGTCGTCTACGTACA 2501 Query 349982 GCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGAT 350041 |||||||| || || |||||| | | || || | | || | | ||||| |||||| Sbjct 2502 GCGTGTGAGCGCGCAAAGCGTACACTCTCGTCGTCGGCACAGGCGTACATTGAGATTGAT 2561 Query 350042 TCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTA 350101 ||||| ||||| | |||||| || | || || ||||| || || ||||| || Sbjct 2562 TCTCTGTTCGATGGTATTGATTTCAACTCGACCATCACGCGTGCGCGTTTCGAAGA--TA 2619 Query 350102 TGTATGGATCTTTTTAGAGCA--ACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAA 350159 ||| || || | ||| || ||||| |||||||| || || || || |||| Sbjct 2620 TGTGCGGTGATTACTTCCGCAAGACGATGGAGCCTGTGGAGAAGGTGTTGCGTGACGCAA 2679 Query 350160 AAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAA 350219 | ||||||| | ||| | | || || || | |||||||| || || ||||| || | Sbjct 2680 AGCTGTCCAAGAGCCAGGTGCACGAGGTGGTACTTGTTGGTGGGTCGACGCGTATCCCCA 2739 Query 350220 AAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATC 350279 | || || ||| | || || || || ||||| ||||| || || | |||||||| | Sbjct 2740 AGGTGCAGCAGCTGCTGTCGGACTTCTTTAACGGCAAGGAGCCCAACAAGTCAATTAACC 2799 Query 350280 CAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGA 350339 | ||||| |||||||| || |||||| | || ||||| | ||| | ||| || | Sbjct 2800 CTGATGAGGCTGTTGCCTACGGTGCTACCGTCCAGGCTGCCATTCTGAGTGGCAACGATT 2859 Query 350340 GTTC---TAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAG 350396 || || | | || || | | || ||||| || || | |||||||| | | Sbjct 2860 CATCGGAGAAGCTACAGGACCTGCTGTTGCTGGATGTGACGCCTTTGTCGCTTGGTCTTG 2919 Query 350397 AAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAA 350456 | || |||||| || ||||| || ||| | | || | |||||||| || || | Sbjct 2920 AGACGGCTGGTGGTGTCATGACGACGCTGATTGCACGTAACACGACTGTACCGACCAAGA 2979 Query 350457 AGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTG 350516 |||| ||||| || || |||| || || || ||||| | || || || || |||| Sbjct 2980 AGTCGCAAACGTTCTCGACATACGCGGACAACCAGCCGGGTGTTCTGATCCAGGTGTTTG 3039 Query 350517 AAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAA 350576 |||| || || | || || || ||| || || | |||| | | | | Sbjct 3040 AAGGCGAGCGGTCCATGACACGCGACAACAATTTGCTGGGCAAGTTTAACTTGGACGGTA 3099 Query 350577 TTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATG 350636 | |||||||||||| | || || ||||||||||| || | |||||||| ||| | |||| Sbjct 3100 TCCCACCAATGCCTCGTGGCGTGCCTCAGATTGACGTGACCTTCGATATCGATGCGAATG 3159 Query 350637 GTATTTTAAATGTTACCGCAGTTGAAAAATC 350667 | ||||| || || | || || || || || Sbjct 3160 GCATTTTGAACGTGTCGGCTGTGGAGAAGTC 3190 >seq325 Length=14119 Score = 358 bits (396), Expect = 2e-93 Identities = 982/1485 (66%), Gaps = 26/1485 (2%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || ||||| | ||||| || || || || |||| ||| ||||| || || ||||| || Sbjct 8176 GGTATCGACCTGGGTACGACGTACTCGTGCGTTGGTGTCTGGCAGAACGACCGTGTGGAG 8235 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| || || || || || | || ||||| || ||||| || || || || || Sbjct 8236 ATCATTGCCAACGACCAGGGAAATCGCACGACGCCGTCGTACGTGGCGTTCACGGACACG 8295 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 || ||| | || |||||| |||| || ||||||| || ||| | | |||||||| Sbjct 8296 GAACGTCTAATCGGTGATGCTGCCAAGAATCAAGTGGCCATGAATGCCCACAATACGGTG 8355 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAATCTGATC 349442 ||||| | || || | ||||| | | ||| |||| || | |||| || || Sbjct 8356 TTTGACGTCAAACGCTTGATTGGGCGCAAGTTTACTGATCCAGAAGTACAG--TCGGACA 8413 Query 349443 TAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTG 349502 | || || | || || | || | || | | ||||| | | ||| Sbjct 8414 TCAAGCACTGGCCGTTCAAGGTCGCTCGCGGTCCTGAGAACAAACCTCAAGTGGTGGTGC 8473 Query 349503 AATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTT 349561 ||| |||||| || || || || || |||||||| || || || ||||| || | Sbjct 8474 AATTTAAAGGGGAGACCAAGACG-TTCCAGCCCGAAGAGATATCGTCTATGGTGCTAATC 8532 Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || ||| || || || || || || | ||| | ||| | |||| || |||| Sbjct 8533 AAGATGCGCGAGATCGCGGAGGCTTACATTGGTAAGCAAGTGAAGAATGCAGTGGTTACG 8592 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || || || ||||| || | |||||| || || ||||| || || |||||| Sbjct 8593 GTCCCTGCTTACTTTAACGACTCGCAGCGTCAGGCGACCAAAGACGCCGGAGCCATTGCT 8652 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || || || || | | || || || || || |||||||| || || || || || | Sbjct 8653 GGTTTGAACGTATTGCGTATTATCAACGAGCCGACTGCTGCTGCTATCGCCTACGGTTTG 8712 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 || |||| | ||| | || | ||| | || || |||||| | || ||||| ||||| Sbjct 8713 GACAAAAAGGGTGGC---GAGCACAATGTGCTCATCTTTGATCTGGGCGGTGGCACTTTC 8769 Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861 |||||||| || || | |||| ||||| || || || || || || ||||| ||||| Sbjct 8770 GATGTATCGCTGCTGAGTATTGAGGAGGGCATCTTCGAGGTGAAGGCTACTGCCGGTGAC 8829 Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTT 349921 || || | || || ||||||||||| || ||||| || | ||||||| || || Sbjct 8830 ACGCACTTGGGCGGCGAAGATTTTGACAACCGTCTGGTGGAGTATTTTGTGGCCGAGTTC 8889 Query 349922 AAGCGTCA--AGCTAAAATTGATAT-TGGAGATAATCCTAGAGCAATGCGTCGCCTAAGA 349978 ||||| | | | ||| ||||| | | || || | | || | || ||||| | Sbjct 8890 AAGCGCAAACACCGCAAA--GATATCTCGGGA-AACCAACGTGCTCTACGACGCCTTCGT 8946 Query 349979 ACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATT 350038 || || || || | |||||||| |||| || || | ||||| | | ||||| ||| Sbjct 8947 ACGGCTTGCGAGAGAGCTAAGCGAACCTTGTCCACTTCCGCCCAAGCGTACATTGAGATT 9006 Query 350039 GATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAA 350098 ||| | ||| ||| |||| |||||| ||| | ||||| ||||| || ||||| || Sbjct 9007 GATACGCTTTTTGAGGGCATCGATTTCAATTCGACGATTACGCGTGCGCGTTTTGAGGAC 9066 Query 350099 TTATGTATGGATCTTTTTAGAGCA-ACAATGGATCCTGTGGAAAAAGTATTAAAAGATGC 350157 || ||| | | |||||| | | || ||||| || || | | |||| | || | Sbjct 9067 TTGTGT-GGAAGCTTTTTTCAAAAGACGATGGAGCCAGTCGCACAAGTTCTGCGTGACTC 9125 Query 350158 AAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCC 350217 ||| | || || || || | | || | || |||||||||| || || ||||| || Sbjct 9126 CAAACTTTCGAAGAACCAAGTGAACGAGATTGTCCTAGTTGGTGGCTCAACTCGTATCCC 9185 Query 350218 AAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAATTA 350276 |||||||| || || | || | ||| || || ||||||| ||| || || |||| Sbjct 9186 GAAAGTTCAGCAATTGTTGATGGACTATTTCAACGGGAAAGAACTGTTCAAG-TCGATTA 9244 Query 350277 ATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATA 350336 |||| ||||| ||||| || |||||||| | || || || | |||||| ||| | Sbjct 9245 ATCCGGATGAGGCTGTGGCGTATGGTGCCACCGTCCAAGCTGCAATTTTAGGTGGTGGTG 9304 Query 350337 AGAGTTCT--AAAATTG-ATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGAT 350393 | ||| ||| || | ||||| || || | |||||| | || | |||||||||| Sbjct 9305 GGTTGTCTTCAAAGCTGCAGGATCTTTTGCTGTTGGATGTAGCCCCGTTGTCGCTTGGAT 9364 Query 350394 TAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAA 350453 | || || |||||| || ||||| || || || | |||| || || || ||| Sbjct 9365 TGGAGACGGCTGGTGGGGTCATGACCAAGCTCATCCCACGTAATACGACCGTTCCAGCAA 9424 Query 350454 AAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTAT 350513 | ||| | || | || || || | ||| || || ||||| | || |||||||| | Sbjct 9425 AGAAGACGCAGTCATTCTCGACGTATGCCGACAACCAGCCCGGTGTTTTGATTCAAGTGT 9484 Query 350514 TTGAAGGTGAACGTGCTCG--CACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAG 350571 |||| || |||| ||||| || ||||| | | || | |||| ||| Sbjct 9485 TTGAGGGCGAAC--GCTCGATGACGCGCGATAACCACCTTTTGGGCAAGTTTAACCTGGA 9542 Query 350572 TGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTC 350631 || ||||| || |||||| |||| || ||||| ||||| ||| | || || ||||| Sbjct 9543 TGGCATTCCGCCCATGCCTCGAGGCGTGCCTCAAATTGATGTCACGTTTGACATTGACGT 9602 Query 350632 AAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAA 350676 ||||| ||||| ||||| || || ||||||| || | ||| || Sbjct 9603 CAATGGCATTTTGAATGTGACGGCGATTGAAAAGTCGACTGGCAA 9647 >seq3526 Length=47547 Score = 246 bits (272), Expect = 9e-60 Identities = 717/1078 (67%), Gaps = 42/1078 (4%) Strand=Plus/Plus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTT-AC 349317 || || || ||||| |||||||||||||| | | ||||| || |||||||| | || Sbjct 5719 GTTGAGATCATTGCCAATGATCAAGGTAATCGTATCACGCCTTCTTACGTTGCTTGGGAC 5778 Query 349318 CGAAAC--TGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAA 349375 ||| ||||||| ||||||||||| |||||| ||||||||| | |||||| | Sbjct 5779 TCGAACGATGAGCGTTTGATTGGTGATGGTGCAAAGAATCAAGCTACGATTAATCCGGAG 5838 Query 349376 AATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAA 349435 || ||| | || |||| ||||| || |||||| | | | |||||| || ||| Sbjct 5839 AAGACGTTGTTCGATGTCAAGCGTCTGATTGGTCGTAAATACAATGACAAGTCGGTCCAA 5898 Query 349436 TCTGATCTAAAACATTTT-CCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 || || | |||| | || |||| | | || ||||| || ||||| |||| Sbjct 5899 TCGGA-CAAAAAGTTGTTGCCTTATGAACTCATTAATAAAGATGGA---AAACCTTTTAT 5954 Query 349495 TGAGGTTGAATATAAAGG-TGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGG 349553 | | || || | | |||| ||| || |||||| || |||||| | || | |||| Sbjct 5955 TCAAGT-GACTGTCAAGGGTGAGAAACGTCAATTTGCTCCTGAAGAAGTCTCTGCCATGG 6013 Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613 | || || |||||| | ||| | |||| ||| | ||| ||| |||||||| Sbjct 6014 TCTTGACAAAGATGAAGCAGATTTCGGAAGGATACATTGGTCGTGAAGTGTTTGATGCTG 6073 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 || | || || || || || ||||| || || || ||| || ||||| |||||||| | Sbjct 6074 TTGTGACAGTCCCTGCTTACTTTAACGACGCTCAACGTCAAGCTACAAAGGATGCTGGTA 6133 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 |||||| || | | |||| | | || ||||||||||| || ||||| || ||||| | Sbjct 6134 CCATTGCTGGTCTGACCGTTCAACGGATCATTAATGAACCGACAGCTGCTGCTATTGCCT 6193 Query 349734 ATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTG 349793 |||| |||| || | | | | ||| || ||| | || | |||||| ||||||| | Sbjct 6194 ATGGCATTGACAAGAAGGCTCAAGGAGAGAAGAATGTGCTGGTCTTTGATCTAGGTGGAG 6253 Query 349794 GTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTG 349853 | || |||||||| | | || | | || | || | |||||||| ||||| Sbjct 6254 GAACCTTTGATGTGACGTTGCTGGCGATCGATGGTGGTGTGTTTGAAGTCTTGGCAACGA 6313 Query 349854 CTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTA 349913 || ||||| ||| | || |||||||| ||||| | || || | | | ||| | | Sbjct 6314 ACGGGGATACGCATTTGGGCGGAGAAGACTTTGACCAACGGATCATGCAGTACTTTATCA 6373 Query 349914 AAGAATTTAAG--CGTCAAGCTAAAATTGATATTGGAGATAATCCTA-GAGCAATGCGTC 349970 | | | ||| | |||| || |||||||| | ||| | ||| | |||| Sbjct 6374 AGAAGTGGAAGAAAGACAAG--AACATTGATAT-----CTCATCGGACAAGCGA-GCGTT 6425 Query 349971 GCCTAAGA-ACTGCGTG----TGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAAC 350025 || |||| | |||| ||||||| || ||| | | || || | | | || Sbjct 6426 GCAGAAGATTCGTCGTGAAGCAGAACGTGTGAAACGTGCGCTGTCTGCT-CAAGCTCAAG 6484 Query 350026 CTC-TATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCA---TCTATTACA 350080 ||| | |||||||||| || ||||| ||||| ||| |||| || ||| | | Sbjct 6485 CTCGTCTTGAAATTGAATC-GTTGCTGGATGG---AGAGGACTTTACAGAGTCTTTGAGT 6540 Query 350081 CGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCA-ACAATGGATCCTGTGGA 350139 ||||| || || || | || | |||| | |||| || | ||| | | ||||||||| Sbjct 6541 CGTGCACGTTTCGAGAAGCTAAATGAGGATTTGTTTA-AGAAGACACTTGGTCCTGTGGA 6599 Query 350140 AAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGA--TTGATGAAGTAGTTTTAGTT 350197 || || | || || || | || | || || || ||||||| | || || ||| Sbjct 6600 GAAGGTGATGAAGGACGC--GGACCTCAAGAAGTCGGAAGTTGATGAGATTGTGTTGGTT 6657 Query 350198 GGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAA 350257 |||||||| || ||||| || || || || || || | || | |||||||||||| Sbjct 6658 GGTGGTTCGACCCGTATCCCCAAGGTCCAGCAATTGATCAAGGATTACTTTAATGGCAAA 6717 Query 350258 GAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGG 350315 ||||| || | | ||||| |||||||||||||| || |||||||||||||||| Sbjct 6718 GAACCGTCGCGTGGTGTGAATCCTGATGAAGCTGTTGCTTACGGTGCTGCTGTTCAGG 6775 >seq3952 Length=25278 Score = 237 bits (262), Expect = 5e-57 Identities = 478/704 (68%), Gaps = 19/704 (3%) Strand=Plus/Plus Query 349201 TATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGT 349260 ||| || || ||| | |||||||| || |||||||| | ||| ||| || ||| || || Sbjct 7128 TATTGGTATTGATCTTGGTACTACGTACTCTTGTGTGGGTGTGTGGAAAGATGGTCAGGT 7187 Query 349261 AGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGA 349320 || || ||||| ||| | | || ||| | || || || |||| |||||||| | || Sbjct 7188 GGAGATCATTGCCAATAGTGAGGGAAACCGTACGACCCCTTCATGGGTTGCATTCAATGA 7247 Query 349321 AACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATAC 349380 || ||| ||| | |||||||| | || || | |||||| |||| |||| | | || || Sbjct 7248 AAGTGAACGTCTCATTGGTGAAGCAGCTAAGATTCAAGCAGCTGGTAATGCTACGAACAC 7307 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAA----TCTACACAAT 349436 ||| |||||||| || || | ||||| | || ||| ||| || || | | | Sbjct 7308 GGTGTTTGATGCCAAACGTATCATTGGACGCAGCTTTAGTGATGAAGTGGTCAAGAAA-- 7365 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 ||| |||||| ||||| ||||| | | ||||| |||||| | |||| Sbjct 7366 --GATGCAAAACACTTTCCATTTACCATCAAGGAAGGAGACGATGATAAGGTCCTGATTG 7423 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTT-TACCCGAAGAAATTTCATCAATGGTT 349555 ||||||| | || || ||| || || | |||| || ||||| || || || ||||| Sbjct 7424 AGGTTGAGTTCAAGGGAGAA-AAGAAGAGTTTTACTCCTGAAGAGATCTCGTCGATGGTG 7482 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 || | |||||||||| || ||||| | | | ||| | || | | | |||||| Sbjct 7483 CTACTACGTATGAAGGAAACAGCAGAAGCTTTTCTTGGTCAGACCATCTCACAGGCTGTT 7542 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 |||||||||| || ||||| || || |||||| | || ||||||||||| Sbjct 7543 GTTACTGTACCTGCTTATTTCAACGACCAACAGCGTCAATCTACCAAAGATGCTGGTTCG 7602 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||||| || | |||| | | || ||||||||||| || ||||| || |||| ||| Sbjct 7603 ATTGCTGGTCTGGATGTCAAACGTATCATTAATGAACCGACGGCTGCTGCCCTTGCCTAT 7662 Query 349736 GGGCTTGATA--AAATGAGTGACCAA--Gaaa-----aaaaTATTCTTATTTTTGATTTA 349786 || || |||| || | || | |||| ||| |||| |||||||| || Sbjct 7663 GGTCTAGATACGAACGCTGGCACGGATGGAAAGGTGTGCAATGTTCTGATTTTTGACTTG 7722 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAA 349846 ||||||||||| |||||||||||| | || | | ||| | || || ||||| || || Sbjct 7723 GGTGGTGGTACCTTTGATGTATCAATCCTTTCGATCGAAAATGGTATCTTTGAGGTCAAG 7782 Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 | || | |||||| || || | ||||| || || ||||| || Sbjct 7783 TCTACGGGTGGTGACACGCACTTGGGTGGTGAGGACTTTGACAA 7826 Score = 84.2 bits (92), Expect = 7e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 ||||| || |||||||| || || || || ||| | |||| || || ||||| || || Sbjct 7823 TCAAAGTCCTCACCACCCAAGTGCGTGTCACCACCCGTAGACTTGACCTCAAAGATACCA 7764 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 | ||| || | |||||||||||||| |||||||||||||| |||||| Sbjct 7763 TTTTCGATCGAAAGGATTGATACATCAAAGGTACCACCACCCAAGTCAAAA 7713 >seq3454 Length=44902 Score = 159 bits (176), Expect = 1e-33 Identities = 176/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || ||||| || || Sbjct 21 CATACCACCACGCAGGCGGAGCACCAGGTGTAGCGTCGACTCCTTCTGGATATTGTAGTC 80 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| || || || ||||||||||| ||||| ||||| ||||| Sbjct 81 CGACAGCGTACGACCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGG 140 Query 140627 AGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 || || ||||| || || ||||| ||| || || || || |||||||||||||| | || Sbjct 141 CGGGATGCCTTCCTTGTCTTGAATCTTTTGC-TTCACGTTGTCAATCGAATCAGACGATT 199 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || | ||||| || || ||||| || |||||||||||||| Sbjct 200 CCACCTCCAGCGTGATCGTCTTGCCCGTCAGTGTCTTGACAAAAATCTGCAT 251 >seq3725 Length=16789 Score = 149 bits (164), Expect = 2e-30 Identities = 209/291 (72%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAA 206508 ||||| | ||||| || || | ||||| || | || ||| ||||| || || ||||| Sbjct 2128 TGGTCCACGTATCGGGCCGTGTCGTTAAACACCCGTAACATGGGAATGATCCCGTTAGAG 2069 Query 206509 GTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATATGTAAT-CC 206567 | ||||| || || | ||||| ||| ||| ||| || || || ||| |||| || Sbjct 2068 GAACCATTAGTGCCACGAATATAGCTGTTAGTGGCTCGTATGTTGTGCATAC-TAATGCC 2010 Query 206568 AATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCATC 206627 ||| || || |||||||| ||||| ||||||| || ||||| | |||||| || || Sbjct 2009 AATCCCACCAGCCCATTTGGAAATGCACGCACATTGCTTCAATGTGTCATAAATACCTTC 1950 Query 206628 AACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTTCC 206687 || |||| | |||||| | ||||||||| || | ||| || || || ||||| Sbjct 1949 AATCGAATCATCCTGCATAGCTAGTAAAAAACACGAGGACAGTTGGGGGCGAGGAGTTCC 1890 Query 206688 AGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAA 206738 ||||||||| || || || || ||||| |||||| | || |||||||| || Sbjct 1889 AGCATTAAACAACGTTGGCGTCGCATGAGTAAAAAACTTCTGAGACATCAA 1839 >seq977 Length=24603 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || |||||||| || || || | ||| || |||||||| || || || ||||||||||| Sbjct 11102 TTCTGAATATTGTAGTCCGAAAGTGTACGGCCATCTTCCAGCTGCTTGCCAGCAAAGATC 11043 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| ||| Sbjct 11042 AGACGTTGCTGGTCAGGTGGAATACCTTCCTTGTCCTGGATTTTCTGCTTGACATTGTCA 10983 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | || || || || || || | |||| ||||| || || | || || ||||| Sbjct 10982 ATGCAGTCGGACGGCTCCACGTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTCACAAAG 10923 Query 140730 ATCTGCAT 140737 |||||||| Sbjct 10922 ATCTGCAT 10915 >seq3780 Length=18573 Score = 109 bits (120), Expect = 2e-18 Identities = 192/280 (69%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 130729 CAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATAT 130788 |||| | ||| || |||||||| ||||| || ||||| || ||||| || || || | | Sbjct 4504 CAGCGAGCATGCCACCAAGCATGACAAAGTCTGCTCCAGCACCAAACGCCTTAGCCACGT 4445 Query 130789 CCCCGGGAGATTTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCAT 130848 | || ||| | |||| || || ||||| || || || ||||| | || || || | || Sbjct 4444 CACCCGGACACGTACAGCCACCGTCAGCGATCACGTGACCATTAAGACCGTGAGCAGAAT 4385 Query 130849 CAGCACACTCTGAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTTTTCTTGTAG 130908 | || || || | ||||| || || || || || || || || ||| | || | Sbjct 4384 CCGCGCATTCCAGCACTGCAGACAGCTGCGGGTAGCCTACACCCGTCTGTTTGCGGGTGG 4325 Query 130909 TACAAACAGCACCTGGACCAATACCAATTTTAACAATATCAGCTCCTGCTAAAATTAGTG 130968 | || || | || |||||||| || | || |||||||||||||| | | | | | Sbjct 4324 TGCACACGGAGCCCGGACCAATGCCCACCTTGACAATATCAGCTCCCGACAGCAGCAATT 4265 Query 130969 CTTCGGTCATTTCTCTAGTAGCCACATTACCTGCTATGAT 131008 | ||| ||| || | |||| ||||||| || || ||||| Sbjct 4264 CCTCGACCATCTCCCCAGTAACCACATTTCCGGCAATGAT 4225 >seq3543 Length=4312 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 4236 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 4295 Query 235950 CCCAGCATCTCCA 235962 ||| || |||||| Sbjct 4296 CCCTGCTTCTCCA 4308 >seq3923 Length=1015 Score = 89.7 bits (98), Expect = 2e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 74488 GTGGGATTCGAACCCACGAGTCTTACGACAGTAGAACTTGAGTCTACCCCCTTAGACCAC 74547 |||||||| |||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 134 GTGGGATTTGAACCCACGAGTGCGAACACAGTAGAACTTGAGTCTACCCCCTTAGACCGC 193 Query 74548 TCGGGCA 74554 ||||||| Sbjct 194 TCGGGCA 200 >seq832 Length=21457 Score = 87.8 bits (96), Expect = 5e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | ||| || | || | || ||||| |||||||| || || || | | Sbjct 3800 CCACCACGAAGACGTAGCACCAAGTGCAAGGTTGACTCCTTTTGAATGTTGTAGTCCGCT 3859 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 || || || ||||| || || || || ||||||||||| ||||||||||| || || || Sbjct 3860 AACGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCCGGGGGG 3919 Query 140631 ATTCCT 140636 |||||| Sbjct 3920 ATTCCT 3925 >seq219 Length=50143 Score = 84.2 bits (92), Expect = 7e-11 Identities = 99/132 (75%), Gaps = 4/132 (3%) Strand=Plus/Minus Query 266272 ATACTCATTGTGAAATTCATCCAAGTACATTATTA--GGTATTTTAGCATCTTGTATTCC 266329 |||||||||| |||||||| || || ||| ||| ||||||| || | |||||| Sbjct 29851 ATACTCATTGCGAAATTCACCC--GTCCATGATTTTGGGTATTTGTGCCAGTATTATTCC 29794 Query 266330 ATTTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGGTAAACAGGC 266389 ||| || || || ||||| | || ||| || ||||| | ||| |||||||| ||||| Sbjct 29793 ATTCCCCGATCACAATCAGTCGCCGCGTAACACGTATCAGTCTGCTATGGGTAAGCAGGC 29734 Query 266390 TATGGGTATCTA 266401 ||||||||| || Sbjct 29733 TATGGGTATTTA 29722 >seq122 Length=47329 Score = 84.2 bits (92), Expect = 7e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| | ||||| | || | || || | |||||| | ||||| |||| Sbjct 19559 AAGATGAAGGAGACGGCTGATGGATTCCTGGGCAAACCTGTAACTCAAGCTGTGGTTACG 19500 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 ||||| || ||||||||||| | || ||| || || || |||||||| | ||||| Sbjct 19499 GTACCGGCTTATTTTAATGACTCACAACGTCAAGCTACTAAGGATGCTGGTAAAATTGCT 19440 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 || | | || || | || || |||||||| || ||||| || |||| ||||| Sbjct 19439 GGTCTGGACGTACTTCGGATCATCAATGAACCTACAGCTGCTGCCCTTGCCTATGG 19384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515175558945983