Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3454 154 1e-32 >seq3454 Length=44902 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| |||||| | || || || || |||||| |||| Sbjct 251 ATGCAGATTTTTGTCAAGACACTGACGGGCAAGACGATCACGCTGGAGGTGGAATCGTCT 192 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||||||| | || || ||||| ||||||||||| |||||||| || || || || Sbjct 191 GATTCGATTGACAACGTGAAGCAAAAGATTCAAGACAAGGAAGGCATCCCGCCTGACCAG 132 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || |||||||| || || | || || ||||| Sbjct 131 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGTCGTACGCTGTCGGACTACAAT 72 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| |||| |||| | || |||| ||||| || Sbjct 71 ATCCAGAAGGAGTCGACGCTACACCTGGTGCTCCGCCTGCGTGGTGGTAT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434896322454720