Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq3454 104 2e-17 >seq3454 Length=44902 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23604 ACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGA 23663 ||| || ||||||||||| || || || || ||||| || |||||||| || || || || Sbjct 258 ACTCAAGATGCAGATTTTTGTCAAGACACTGACGGGCAAGACGATCACGCTGGAGGTGGA 199 Query 23664 CTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCC 23723 || | || | |||| | | || ||||| ||| ||||| ||||| | ||||| Sbjct 198 ATCGTCTGATTCGATTGACAACGTGAAGCAAAAGATTCAAGACAAGGAAGGCATCCCGCC 139 Query 23724 AGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGA 23783 || || |||||| | || ||||| ||||| || |||||||||| || || | || Sbjct 138 TGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGTCGTACGCTGTCGGA 79 Query 23784 TTACAACATACAAAAAGAGTCCACATTACA 23813 ||||| || || || ||||| || |||| Sbjct 78 CTACAATATCCAGAAGGAGTCGACGCTACA 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337992870742988