Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2452 104 2e-17 >seq2452 Length=30100 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 18971 AATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATC 19030 ||||| ||||||| || |||| ||| |||||||||||||| || | || ||| | || Sbjct 23675 AATGGCGTTACCTCCGTGCCACATGTTTTGTCAGTTTTACGTGGCGGATGGCGAACTGTC 23616 Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090 ||||| | |||||| | |||| || ||||| || || || || || || ||||| | Sbjct 23615 GTGCCAGATGTACCAGCGCTCGGCCGACATGGGACTAGGTGTGCCATTTAATATTGCCAG 23556 Query 19091 ATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAAT 19150 ||||| | || || | || ||||| || |||||| ||| | || || || || Sbjct 23555 CTATGCGTTGCTAACGCGTTTGGTCGCGCAAGTGGTAGGACTGAAACCTGGCGAGTTCAT 23496 Query 19151 TCATACAATGGGGGATGCACATATTTACTTGAATCATATAGA 19192 ||| || || || || ||||| || |||||||| |||| Sbjct 23495 CCATGTCATTGGTGACGCGCATATCTATTTGAATCACGTAGA 23454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399482639894415