Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3976 84.2 5e-11 >seq3976 Length=80323 Score = 84.2 bits (92), Expect = 5e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 157197 AAAAGTCCGCATCCAAACAAAACTGCTGCTTCTCACGTTCGAGCAAAACCCCGGGCTTGC 157256 ||||||||||||||| | |||| || | |||| ||| || || | |||| Sbjct 35735 AAAAGTCCGCATCCAGAGTAAACACTTGATCCTCAGCCGCGACACCCACACCAGCCTTGG 35794 Query 157257 TGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCA 157316 |||||| |||| | ||||| |||||||||||||| || || || || ||||| |||| Sbjct 35795 AATACTCGCCCACACGTTTCTCGAAAAAGTTGGTCTTGCCTTGTAGCGAGATCATATCCA 35854 Query 157317 TCCACTCGAATGGGTT 157332 |||| |||||||| || Sbjct 35855 TCCAGTCGAATGGATT 35870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073706045268416