Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3976 87.8 1e-12 >seq3976 Length=80323 Score = 87.8 bits (96), Expect = 1e-12 Identities = 116/156 (74%), Gaps = 4/156 (3%) Strand=Plus/Minus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCA 22798 |||||| ||||| ||||| | || |||||| | | || ||||| || || ||| | | Sbjct 36234 ACGTCTATTGGCGTTTGCTTCGGTAGAAGGCATTTTCTTCTCTGGCTCCTTCTGCT-CTA 36176 Query 22799 TATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGG-TTGGCGTTTTCCAACGAGTTGATT 22857 | || ||||| ||||||||| || ||||| || || || || || |||||| | ||| Sbjct 36175 TCTTTTGGCTCAAGAAACGTGGTCTGATGCCTGGTCTTAGC-TTCTCGAACGAGCTAATT 36117 Query 22858 AGCCGTGACGAAGGTCTACACTGTGACTTTGCTTGT 22893 || ||||| |||||| | ||| |||||||||||| Sbjct 36116 AGTCGTGATGAAGGTATGCACACGGACTTTGCTTGT 36081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356214553413961