Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1055 123 2e-23 >seq1055 Length=24595 Score = 123 bits (136), Expect = 2e-23 Identities = 146/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 24993 GGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 |||| ||||| || ||||||||||||||||| || || |||| || | || |||||| Sbjct 13692 GGAATCATGCAGATCTTTGTAAAGACTTTGACAGGCAAGACCATTACTTTGGACGTGGAG 13633 Query 25053 TCGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110 |||| ||| || || || || ||||| |||||| ||||| ||||| ||||||| Sbjct 13632 CCGTCCGACTGCATTGA--CAATGTCAAGCAGAAAATCCAGGACAAGGAAGGTATTCCAC 13575 Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170 ||||||| ||||| | || ||||| ||||| || | ||||| | ||| || || | Sbjct 13574 CTGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGTCGTACGCTGTCGG 13515 Query 25171 ATTACAATATTCAAAA 25186 | ||||||||||| || Sbjct 13514 ACTACAATATTCAGAA 13499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433304831441405