Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1055 100 2e-16 >seq1055 Length=24595 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||||| || || || || | ||| | || ||||| | || Sbjct 13686 ATGCAGATCTTTGTAAAGACTTTGACAGGCAAGACCATTACTTTGGACGTGGAGCCGTCC 13627 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | ||| || |||| || ||||| || |||||||| ||||||||||| || || Sbjct 13626 GACTGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGTATTCCACCTGACCAG 13567 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | || || || || | || || ||||| Sbjct 13566 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGTCGTACGCTGTCGGACTACAAT 13507 Query 22399 ATTCAAAA 22406 ||||| || Sbjct 13506 ATTCAGAA 13499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419705558586655