Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1055 105 2e-17 >seq1055 Length=24595 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || || ||||| ||||| | ||||| || |||||||| | || || || || |||||| Sbjct 13499 TTCTGAATATTGTAGTCCGACAGCGTACGACCGTCTTCCAGCTGCTTGCCAGCAAAGATC 13558 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||| || | ||| || ||||| || |||||||||||| || || || || Sbjct 13559 AGACGCTGCTGGTCAGGTGGAATACCTTCCTTGTCCTGGATTTTCTGCTTGACATTGTCA 13618 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAT 288465 || | ||| || || || || | || || ||||| || |||| |||||| || || Sbjct 13619 ATGCAGTCGGACGGCTCCACGTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTTACAAAG 13678 Query 288466 ATCTGCATTAT 288476 |||||||| || Sbjct 13679 ATCTGCATGAT 13689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179588093469386