Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1055 116 4e-21 >seq1055 Length=24595 Score = 116 bits (128), Expect = 4e-21 Identities = 143/190 (75%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || ||||| ||||| || | | || || ||||||| ||||||||||| ||| | || Sbjct 13499 TTCTGAATATTGTAGTCCGACAGCGTACGACCGTCTTCCAGCTGCTTGCCAGCAAAGATC 13558 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || ||||||||||| || ||||| ||||| || || || ||||| ||||| ||| | | Sbjct 13559 AGACGCTGCTGGTCAGGTGGAATACCTTCCTTGTCCTGGATTTTCTGCTTGACATTGT-C 13617 Query 64376 ACTGTA-TC-ACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | || | || |||| ||||| || | ||| | ||||||||| |||||||| ||||| | Sbjct 13618 AATGCAGTCGGACGGC-TCCACGTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTTACAA 13676 Query 64434 AAATTTGCAT 64443 | || ||||| Sbjct 13677 AGATCTGCAT 13686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499617400728280