Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1055 86.0 4e-12 >seq1055 Length=24595 Score = 86.0 bits (94), Expect = 4e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 15020 CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCT 15079 ||||||| | || |||||||| | |||| |||||| ||||| |||||| ||||||| Sbjct 13530 CGTCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGAATACCTTCCT 13589 Query 15080 TGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAA 15139 |||| ||||| || ||| | || || ||| || ||||| || |||| Sbjct 13590 TGTCCTGGATTTTCTGCTTGACATTGTCAATGCAGTCGGACGGCTCCACGTCCAAAGTAA 13649 Query 15140 TGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| || ||||||| ||| |||||||| || ||||| Sbjct 13650 TGGTCTTGCCTGTCAAAGTCTTTACAAAGATCTGCAT 13686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357372891478295