Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq87 172 4e-37 seq2797 159 3e-33 seq912 143 2e-28 seq4053 136 3e-26 seq841 102 6e-16 seq308 89.7 4e-12 >seq87 Length=14093 Score = 172 bits (190), Expect = 4e-37 Identities = 910/1440 (63%), Gaps = 35/1440 (2%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 || |||||||| | ||| |||||| | || | ||||| ||||| ||||||||||| || Sbjct 9539 GCCGTCACATTCAAAATGCCATTGACGTCAATGTCAAACGTGACATCAATTTGAGGCACG 9480 Query 517319 CCTCTCTGAG-CA--GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCT 517375 |||| ||| || || || || || |||| ||||| | |||| | | ||||| Sbjct 9479 CCTC---GAGGCATGGGCGGAATGCCATCCAGGTTAAACTTGCCCAAAAGGTGGTTATCG 9423 Query 517376 TTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAA 517435 || | ||||| ||||| || | ||| || ||| | | || || || | | Sbjct 9422 CGCGTCATCGAGCGTTCGCCCTCAAACACTTGAATCAAAACACCGGGCTGGTTGTCGGCA 9363 Query 517436 TAAGTTGTAAAT-ACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATT 517494 || || | ||| ||| | || ||| | |||| || || || | || | || Sbjct 9362 TACGTCGAGAATGACTGCGTCTTCTTTGCT-GGAACGGTCGTATTACGTGGGATGAGCTT 9304 Query 517495 GGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 517554 |||||| | ||||| || || || || ||||| || | || | ||||| | || | Sbjct 9303 GGTCATGACCCCACCAGCCGTCTCCAATCCAAGCGACAACGGGGCTACATCCAACAGCAA 9244 Query 517555 AATATTTTGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGCTTGAATAGCAGC 517611 || || || || ||| | |||| || | ||| || ||||| | | || Sbjct 9243 AAGATCCTGCAGCTTTGAAGACAACCCACCACCACCTAAAATTGCAGCTTGGACGGTGGC 9184 Query 517612 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 517671 |||||| || ||||| ||||| ||||||| | | |||| ||| || |||||| | Sbjct 9183 ACCATACGCCACAGCCTCATCCGGATTAATCGACTTGAACAGTTCTTTCCCGTTGAAATA 9124 Query 517672 ATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 | | | ||| || || || ||||||| ||| || ||||||| ||||| || Sbjct 9123 GTCCATCAACAATTGCTGAACTTTCGGGATACGAGTTGAGCCACCAACTAGGACAATCTC 9064 Query 517732 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 | ||| || || ||||| || || | ||||| | | || || || | Sbjct 9063 GTTCACTTGGTTCTTCGAAAGTTTGGAGTCACGCAGAACTTGTGCGACTGGCTCCATCGT 9004 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851 | | ||| ||| | ||| | || || || || | |||| || ||| | Sbjct 9003 CTTTTGAAAAAAGCTTCCACACAAGTCCTCAAAACGCGCACGCGTAATCGTCGAATTGAA 8944 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGAGTCGAAGAAGATAGTG 517910 ||| || || || || | | ||||| ||||| ||| | ||| | |||| || | | Sbjct 8943 ATCGATGCCCTCAAAAAGCGTATCAATCTCAAT-GTACGCTTGGGCGGAAGTGGACAAGG 8885 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT------TTTGCTGATT 517964 || ||||| | || || || || | || | ||||| || ||| | || Sbjct 8884 TTCGCTTAGCTCTCTCGCAAGCCGTACGAAGGCGTCGTAGAGCACGTTGGTTTCCCGA-- 8827 Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGAT 518024 ||| |||| | | ||| | |||||| || | ||| | | || ||||| | Sbjct 8826 GAT----ATCTTTGCGGTGTTTGCGCTTGAACTCGGCCACAAAATACTCCACCAGACGGT 8771 Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 | ||||||||||| || ||||| | || | || | ||||| | || | ||| | | Sbjct 8770 TGTCAAAATCTTCGCCGCCCAAGTGCGTGTCACCGGCAGTAGCCTTCACCTCGAAGATGC 8711 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | || |||| | || || | |||||| || ||||| |||| |||||| || || | Sbjct 8710 CCTCCTCAATACTCAGCAGCGATACATCGAAAGTGCCACCGCCCAGATCAAAGATGAGCA 8651 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 |||| || | | ||||| || | ||| || || | |||||||||||| || | Sbjct 8650 CATTGTGCTC---GCCACCCTTTTTGTCCAAACCGTAGGCGATAGCAGCAGCAGTCGGCT 8594 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 | || ||||| | ||| || || | ||||||||| ||| || ||||| || || || | Sbjct 8593 CGTTGATAATACGCAATACGTTCAAACCAGCAATGGCTCCGGCGTCTTTGGTCGCCTGAC 8534 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 || || |||||||| || ||||| || |||| || |||| | |||| ||||||| Sbjct 8533 GCTGCGAGTCGTTAAAGTAAGCAGGGACCGTAACCACTGCATTCTTCACTTGCTTACCAA 8474 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG-- 518382 | ||||| || | | ||| || ||| | ||| || || || | ||| || Sbjct 8473 TGTAAGCCTCCGCGATCTCGCGCATCTTGATTAGCACCATAGACGATATCTCTTCGGGCT 8414 Query 518383 GGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATT---ACCAAC 518439 |||| | ||||| || || | || || | | | ||||| || | | | Sbjct 8413 GGAACGT--CTTGGTCTCCCCTTTAAATTGCACCACCACTTGAGGTTTGTTCTCAGGACC 8356 Query 518440 ATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATC 518499 | || || || ||||||| || || || || || || | | ||| |||| | Sbjct 8355 GCGAGCGACCTTGAACGGCCAGTGCTTGATGTCCGACTGTACTTCTGGATCAGTAAACTT 8296 Query 518500 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATA 518559 | ||||| || ||||| | ||||| | |||||| | ||| || || |||||| Sbjct 8295 GCGCCCAATCAAGCGTTTGACGTCAAACACCGTATTGTGGGCATTCATGGCCACTTGATT 8236 Query 518560 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 518619 ||||| ||||| || || ||| |||| || || || || | || || || || || || Sbjct 8235 CTTGGCAGCATCACCGATTAGACGTTCCGTGTCCGTGAACGCCACGTACGACGGCGTCGT 8176 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 |||||| || || || || ||||| || || || | || ||||| ||||| || || Sbjct 8175 GCGATTTCCCTGGTCGTTGGCAATGATCTCCACACGGTCGTTCTGCCAGACACCAACGCA 8116 >seq2797 Length=3805 Score = 159 bits (176), Expect = 3e-33 Identities = 907/1434 (63%), Gaps = 33/1434 (2%) Strand=Plus/Minus Query 517264 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 517323 ||| || | ||| ||||| ||||| | ||| || || || ||||| ||||| || || | Sbjct 3173 CACGTTCAAAATGCCATTCGCATCGATATCGAAGGTCACGTCAATCTGAGGCACGCCAC- 3115 Query 517324 CTGAG-CA--GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT 517380 ||| || |||||||| || ||||| ||||| | ||||| ||| || || || Sbjct 3114 --GAGGCATTGGTGGGATACCGTCCAAGTTAAACTTGCCCAGCAAATTGTTGTCGCGTGT 3057 Query 517381 GAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGT 517440 | || || || || || | ||||| ||| | | || || || | || || Sbjct 3056 CATGGACCGCTCGCCTTCAAACACCTGGATCAGAACACCCGGCTGGTTGTCCGCGTATGT 2997 Query 517441 TGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCAT 517500 | || | || || || || | || ||||| | |||| | | ||||| Sbjct 2996 CGAGAACGTTTGCGACTTCTTGGTCGGTACAGTCGTGTTACGTGCAATCAGCGTCGTCAT 2937 Query 517501 AATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATT 517560 | |||||| || || || | |||||| || | ||| || ||||| | | | | | Sbjct 2936 GACACCACCAGCCGTCTCAAGACCAAGCGACAAAGGCGTCACATCCAGCAACAGCAGGTC 2877 Query 517561 TTGAAGTTTTTC--ATCAGT--TTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 517616 || || || || || | | ||| ||| ||||| || || || | | |||||| | Sbjct 2876 CTGTAGCTTCTCCGATGAATCGTTG-CCACTCAGAATGGCAGCCTGGACGGTAGCACCGT 2818 Query 517617 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 517676 | |||||||| |||||||| |||| | | || | | || || || || || | | Sbjct 2817 AGGCAACAGCCTCATCAGGGTTAATTGACTTGTTGGGCTCCTTGCCGTTAAAGAAGTCCG 2758 Query 517677 AAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 517736 | || || || ||||| || ||||| | || || ||||| | ||| | || |||| Sbjct 2757 ACAGCAGCTGCTGCACCTTGGGGATACGCGTCGACCCACCAACAAGTACCACCTCGTGCA 2698 Query 517737 CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC 517796 |||| || ||| |||| || || || || || || || || | | | Sbjct 2697 CCTGGCTCTTGGACAGCTTTGCGTCACGCAACACCTTCTCCACAGGCTCCATCGTCTTGC 2638 Query 517797 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAA 517856 || | || || | |||||||| || | || | || || |||||| Sbjct 2637 GGAAGTAATCACCGCACATATCTTCGAAACGCGCACGCGTGATGGTCGAGTTGAAATCAA 2578 Query 517857 TTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGAGTCGAAGAAGATAGTGCACGT 517915 | || ||||||| |||||||| ||||| ||| | || | ||| || || |||| ||| Sbjct 2577 TACCATCGAACAGAGAATCAATCTCAAT-GTACGCCTGTGCCGACGACGAGAGTGTACGC 2519 Query 517916 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCT 517975 || || || ||||| ||||| | ||| | || | ||| |||| || ||| | Sbjct 2518 TTTGCGCGCTCACACGCTGTACGTAGACGACGGAGGGCAC--GCTGGTTCTCCGTAATGT 2461 Query 517976 GTTTTATAT--TTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAA 518031 || | || | |||||| || | | ||| | || ||||| || ||||| Sbjct 2460 CCTTGCGGTGCTTACGCTTGAACTCCTGGGTGAA--ATGGTCTACCAGACGGTTGTCAAA 2403 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091 || ||||| ||||| | || | || | || ||| | || | |||| || ||||| Sbjct 2402 GTCCTCACCACCCAAGTGCGTGTCACCAGCTGTGGCTTTCACCTCAAAAATGCCCTCTTC 2343 Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151 || || || | || ||| ||| || || || | ||||| || || || || Sbjct 2342 AATGCTCAGTAGCGACACGTCAAAGGTACCGCCGCCAAGGTCAAAGATCAGCACGTTACG 2283 Query 518152 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 518211 ||| | | | | || || |||||||| |||| ||||||||| || ||||| || || Sbjct 2282 TTCACCGCCCT---TCTTGTCCAGACCATAGGCAATAGCAGCAGCCGTCGGTTCGTTGAT 2226 Query 518212 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 518271 ||| | | |||||||| |||||||| || || || || |||||||| | || || Sbjct 2225 AATACGGAGCACATTAAGTCCAGCAATGGCACCGGCGTCCTTGGTGGCTTGACGCTGCGA 2166 Query 518272 ATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331 || || ||||| || || || ||||| || |||| | || || || || || |||| Sbjct 2165 GTCATTGAAATAGGCCGGTACCGTAATCACTGCATTCTTCACCTCCTTGCCGATGAAAGC 2106 Query 518332 GCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--GGAATAT 518389 ||| | ||| ||| | | | ||| || || || | || || |||| | Sbjct 2105 TTCCGCCACCTCACGCATCTTAATCAGGACCATGGACGAGATCTCCTCAGGCTGGAACGT 2046 Query 518390 TGCTTGGATTCATT-TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA---T 518445 ||| || || |||| || | | || | ||| || | ||| || | | Sbjct 2045 --CTTTGACTCGCCCTTGAATTGCACCGT-AATCTGTGGCTTGTCACCGGCACCAGACGT 1989 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 |||||||||||||||| ||| | || | |||||| | |||| ||| | | ||| Sbjct 1988 GACTTTAAATGGCCAGTGCTTCGTGTCAGCTTGAACGATCGGGTCCGAAAACTTGCGACC 1929 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 ||| | || || || || || | || ||| || || || || |||| | || || Sbjct 1928 AATGAGGCGCTTGGCGTCGAACACCGTGTTGTGTGCGTTCATAGCCACTTGGTTCTTAGC 1869 Query 518566 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 518625 ||||| ||||| ||| | || || || || |||| || || || || || ||||| || Sbjct 1868 GGCATCACCAATAAGACGCTCCGTGTCCGTGAATGCCACGTAGGACGGCGTCGTGCGGTT 1809 Query 518626 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 |||||| || || |||||||| || || | || ||||| ||||| || || Sbjct 1808 ACCTTGGTCGTTAGCAATAATCTCTACGCGGTCGTTCTGCCACACACCGACGCA 1755 >seq912 Length=35270 Score = 143 bits (158), Expect = 2e-28 Identities = 422/641 (66%), Gaps = 21/641 (3%) Strand=Plus/Minus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 ||||| ||||| || ||||| | |||| || ||| || |||| || | ||| Sbjct 6345 TCAAAGTCTTCTCCGCCCAAATGCGTATCCCCGTTCGTTGCCAAGACTTCAAACACACCA 6286 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 | || | | || | || |||||| |||||| ||||| | |||||| | || ||| Sbjct 6285 CCATCGATCGCCAGCAACGTCACATCAAAGGTTCCTCCACCTAGATCAAAGACCAGCACA 6226 Query 518147 TTCATTTCTTTGTCTTGG---TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 ||| | ||| |||| || || |||| ||||| |||| ||||||||| || ||| Sbjct 6225 TTCTTCTCTC---CTTGAGCCTTCTTGTCAATGCCATAGGCAATAGCAGCAGCTGTCGGT 6169 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 |||||||| || | ||| | ||||||||||| | || ||||| || || ||||| Sbjct 6168 TCATTAATGATCCGTTGAACGGTCAGACCAGCAATGGTACCAGCATCCTTTGTAGCTTGA 6109 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 | ||| | |||||||| || ||||| || || | ||| |||||| ||||| |||| Sbjct 6108 CGTTGAGCGTCGTTAAAGTAAGCAGGGACTGTCACAACAGCATCAAACACTTCACGACCA 6049 Query 518324 ATATAAGCGCTTGCCG---TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380 || || | | ||| | || ||||| || | || | ||| | || | || ||| Sbjct 6048 ATGTA---TCCTTCCGAAATCTGCTTCATCTTTGTCAAGACCATGGCAGAGACTTCTTCA 5992 Query 518381 GGGGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 518439 || | | |||| | | | |||| | | |||| || | | ||||| | | Sbjct 5991 GGAGCAAATTGACGTTTCTCACCCTTGACA-GTCACTTGAATAAAAGGTTTTCCATCTTT 5933 Query 518440 ATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAAC--ACTTTGGTCATTAAAA 518497 |||||| | || | | ||| | | || | || ||||| || |||| |||||| | Sbjct 5932 ATTAATGAGTTCATAAGGCAACAACTTTTTGTCCGATTGGACCGACTT--GTCATTGTAT 5875 Query 518498 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGA 518557 | | |||||| | || || |||| || | || || |||||||| | ||||||| Sbjct 5874 TTACGACCAATCAGACGCTTGACATCGAACAACGTCTTCTCCGGATTAATCGTAGCTTGA 5815 Query 518558 TATTTGGCTGCATCTCCAATCAGATGTTC--TGTCTCTGT-AAATGAAACATATGATGGA 518614 | || || |||| ||||||| | | || || || | | ||| || || || Sbjct 5814 TTCTTTGCACCATCACCAATCAAACGCTCATCGTTCGAGTCCCAAGCAACGTAAGAAGGC 5755 Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTT 518655 || | ||||||||||||||||| ||||| || ||||| || Sbjct 5754 GTGATACGATTACCTTGATCATTGGCAATGATCTCAACCTT 5714 >seq4053 Length=21002 Score = 136 bits (150), Expect = 3e-26 Identities = 458/704 (65%), Gaps = 22/704 (3%) Strand=Plus/Plus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || ||||| || ||||| ||||| | || | || ||||| | || | || | Sbjct 13310 TTGTCAAAGTCCTCACCACCCAAGTGCGTGTCACCACCCGTAGACTTGACCTCAAAGATA 13369 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 |||| ||| | || | | | ||||||| ||| |||||||||| |||||||| || Sbjct 13370 CCATTTTCGATCGAAAGGATTGATACATCAAAGGTACCACCACCCAAGTCAAAAATCAGA 13429 Query 518144 ACATT------CATTTCTT---TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 ||||| | || | | || | ||| |||| |||||||| |||| |||||| Sbjct 13430 ACATTGCACACCTTTCCATCCGTGCCAGCGTTCGTATCTAGACCATAGGCAAGGGCAGCA 13489 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 || || ||||||||||| || | |||| ||||||||||| || |||||||| Sbjct 13490 GCCGTCGGTTCATTAATGATACGTTTGACATCCAGACCAGCAATCGAACCAGCATCTTTG 13549 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 || | ||| | ||| ||||| ||||| ||||| ||||||| ||| || | | | Sbjct 13550 GTAGATTGACGCTGTTGGTCGTTGAAATAAGCAGGTACAGTAACAACAGCCTGTGAGATG 13609 Query 518315 TCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374 | ||||| | |||| ||| |||| ||||| || | ||| || || || Sbjct 13610 GTCTGACCAAGAAAAGCTTCTGCTGTTTCCTTCATACGTAGTAGCACCATCGACGAGATC 13669 Query 518375 TGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATT 518433 | ||| || | | | ||| ||| |||| | | || || ||| || || Sbjct 13670 TCTTCAGGAGTAAAACTCTTCTTTTCTCCCTTGAACTCA-ACCTC--AATCAGG-ACCTT 13725 Query 518434 ACCAACAT-TAATAACTT-----TAAATGGCCAGTATTTCATATC-TGATTGAACACTTT 518486 | || | | | | ||| ||||||| ||| ||| ||| | |||| ||| || Sbjct 13726 ATCATCGTCTCCTTCCTTGATGGTAAATGGAAAGTGTTTTGCATCTTTCTTGACCAC-TT 13784 Query 518487 GGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAA 518546 ||| |||| | ||||| | ||||| |||||||| | || || || | |||| Sbjct 13785 CATCACTAAAGCTGCGTCCAATGATACGTTTGGCATCAAACACCGTGTTCGTAGCATTAC 13844 Query 518547 TTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACAT 518606 || |||||| || ||||| || ||||| ||| |||| | || | |||| ||| Sbjct 13845 CAGCTGCTTGAATCTTAGCTGCTTCACCAATGAGACGTTCACTTTCATTGAATGCAACCC 13904 Query 518607 ATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCC 518666 |||| || || || || || || | | ||| ||||| || || || | ||||| || || Sbjct 13905 ATGAAGGGGTCGTACGGTTTCCCTCACTATTGGCAATGATCTCCACCTGACCATCTTTCC 13964 Query 518667 ATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 518710 | ||||| |||||| | || || || | ||||||||||||| Sbjct 13965 ACACACCCACACAAGAGTACGTAGTACCAAGATCAATACCAATA 14008 >seq841 Length=44833 Score = 102 bits (112), Expect = 6e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | |||||| |||| |||||||| || |||||||| || || | | || | Sbjct 16897 TTGTCCATACCATAGGCAAGGGCAGCAGCTGTAGGTTCATTGATGATCCGAAGTACGTCC 16956 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 |||||||||||| | || ||||| ||||| ||||| | |||||| || |||||||| || Sbjct 16957 AGACCAGCAATTTTACCAGCATCCTTAGTAGCTTGACGTTGTGAGTCATTAAAATAAGCC 17016 Query 518288 GGAACAGTAATAACGGCATCAGTTAC 518313 || || |||| || || | |||||| Sbjct 17017 GGTACCGTAACCACAGCTTGAGTTAC 17042 Score = 93.3 bits (102), Expect = 3e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 ||| || ||||| || || || || |||||||| || || ||| || || | ||| || Sbjct 16905 ACCATAGGCAAGGGCAGCAGCTGTAGGTTCATTGATGATCCGAAGTACGTCCAGACCAGC 16964 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 ||||||| ||| ||| ||| ||||| | |||| |||||||||||| || ||||| || Sbjct 16965 AATTTTACCAGCATCCTTAGTAGCTTGACGTTGTGAGTCATTAAAATAAGCCGGTACCGT 17024 Query 322363 AATAACTGCTTTATTAATAGGTTT 322386 || || |||| | | | |||||| Sbjct 17025 AACCACAGCTTGAGTTACAGGTTT 17048 >seq308 Length=13039 Score = 89.7 bits (98), Expect = 4e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 || ||||| ||||| ||| | || ||||||||||| || ||||| ||| | || || ||| Sbjct 11666 GGCAAAGAGGGTCGCATTCGTGGGAATTTGATGGGCAAGCGTGTGGATTTTTCGGCGCGT 11607 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTC 668966 || || |||||| | || || || |||||| || || |||| ||||| |||| Sbjct 11606 ACGGTGATTACTGCCGACCCTAACATTGCTATCGATCAAGTGGGTGTACCTC 11555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780604702609222