Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4330 86.0 1e-11 >seq4330 Length=10061 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 221061 TACGCATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCA 221120 |||| | |||| |||||| | | || || |||| | || | || || |||||||| Sbjct 3127 TACGGACCTCGGGCGTCCAGATATCCAGATCGATCAGCTCTTTCATCAGGTACTTGTTCA 3068 Query 221121 CCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGA 221180 | | ||| || || | ||||| | | | ||||| ||| || ||| |||| |||| Sbjct 3067 CGATCGTGAACTCACCAGCAAGCACACGTCGGTTGTACATGTTCGACGTGTACGGCTCGA 3008 Query 221181 TGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCA 221240 || ||||||||| || ||||||||||| || || || ||||| || ||||| |||| Sbjct 3007 TGGACTCGTTGTTACCAAGGATCTGAGCAGTCGAAGCAGTAGGCATAGGAGCCACTAGCA 2948 Query 221241 GACTGTTGCG 221250 | |||||| Sbjct 2947 AAGAGTTGCG 2938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928793864473280