Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq2452 98.7 4e-16 >seq2452 Length=30100 Score = 98.7 bits (108), Expect = 4e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 52080 TCTGCTTGGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTC 52139 || ||||||||| || |||| | |||| |||||||| |||| ||||| | | | Sbjct 23704 TCAGCTTGGAATCCGGCTGATCTAAATGAAATGGCGTTACCTCCGTGCCACATGTTTTGT 23645 Query 52140 CAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATG 52199 || || || || || || || | || |||||||| |||| ||||| || ||||||||| Sbjct 23644 CAGTTTTACGTGGCGGATGGCGAACTGTCGTGCCAGATGTACCAGCGCTCGGCCGACATG 23585 Query 52200 TTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGA 52259 | || || || ||||| |||||||||||| | ||||| |||| | || | || | | Sbjct 23584 GGACTAGGTGTGCCATTTAATATTGCCAGCTATGCGTTGCTAACGCGTTTGGTCGCGCAA 23525 Query 52260 GCAGTTGGCCTTGATGTTGGTGAATTCAT 52288 | || || || | ||| || ||||| Sbjct 23524 GTGGTAGGACTGAAACCTGGCGAGTTCAT 23496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190086096830070