Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245735.1_202017-08-10] 4,020 sequences; 24,880,192 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3527 84.2 5e-11 >seq3527 Length=112193 Score = 84.2 bits (92), Expect = 5e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 157197 AAAAGTCCGCATCCAAACAAAACTGCTGCTTCTCACGTTCGAGCAAAACCCCGGGCTTGC 157256 ||||||||||||||| | |||| || | |||| ||| || || | |||| Sbjct 70450 AAAAGTCCGCATCCAGAGTAAACACTTGATCCTCAGCCGCGACACCCACACCAGCCTTGG 70509 Query 157257 TGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCA 157316 |||||| |||| | ||||| |||||||||||||| || || || || ||||| |||| Sbjct 70510 AATACTCGCCCACACGTTTCTCGAAAAAGTTGGTCTTGCCTTGTAGCGAGATCATATCCA 70569 Query 157317 TCCACTCGAATGGGTT 157332 |||| |||||||| || Sbjct 70570 TCCAGTCGAATGGATT 70585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073711094319360