Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245735.1_202017-08-10] 4,020 sequences; 24,880,192 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3868 95.1 1e-14 >seq3868 Length=24320 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || |||||| |||||||||||||||| || || || || ||||| ||| Sbjct 11069 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGTTGCTGGTCAGGTGGAATACCTTCCTTG 11010 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || |||||| || || | | || | ||||| |||||||| || | || | Sbjct 11009 TCCTGGATTTTCTGCTTGACATTGTCAATGCAGTCGGACGGCTCCACGTCCAAAGTAATG 10950 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| ||||| || || || || || ||||| Sbjct 10949 GTCTTGCCTGTCAAAGTCTTCACAAAGATCTGCAT 10915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496039072784000