Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245735.1_202017-08-10] 4,020 sequences; 24,880,192 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3846 82.4 7e-11 >seq3846 Length=16475 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 71658 TCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATG 71717 |||||||| | |||| ||| |||| ||||| || || ||||| |||| | Sbjct 5471 TCGAGCATTTTAAAACAGGGGATCAACTTTGGAACGCAGCACAGCGTGAGCTTGTGGTTT 5530 Query 71718 AGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTC 71777 ||| ||||| ||||| ||| | ||||||||||||| ||| ||| | || |||||||| | Sbjct 5531 CGGGCAAAATGCACGGCTACATGCGCATGTACTGGGGCAAGAAGTTGCTGGAGTGGACAC 5590 Query 71778 AAACTCCCGA 71787 ||||||| || Sbjct 5591 AAACTCCGGA 5600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478638347214400