Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245735.1_202017-08-10] 4,020 sequences; 24,880,192 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3532 107 2e-18 >seq3532 Length=32361 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 172762 GAGTTGCGCCACTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACC 172821 |||||||||||| || |||||||| ||||| | || ||||||||||| || ||||| Sbjct 20898 GAGTTGCGCCACAGACGCATCGCGCACATTCAAAAGTTTGCCACGGAGAGGAAAGACACC 20839 Query 172822 GTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACC 172881 ||| || ||||| || || || | |||||| || ||||| || | ||| || || ||||| Sbjct 20838 GTACTGGTCACGCCCGACAACTGCAAGACCTGCCACTGCTAGTGCCTTTGCTGAGTCACC 20779 Query 172882 CTCCGTCACGATGAGCG 172898 || |||| ||| |||| Sbjct 20778 TTCGGTCAGGATAAGCG 20762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597323582981600