Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245735.1_202017-08-10] 4,020 sequences; 24,880,192 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1193 172 4e-37 seq759 159 3e-33 seq378 143 2e-28 seq3361 136 3e-26 seq3540 102 6e-16 seq383 89.7 4e-12 >seq1193 Length=14559 Score = 172 bits (190), Expect = 4e-37 Identities = 910/1440 (63%), Gaps = 35/1440 (2%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 || |||||||| | ||| |||||| | || | ||||| ||||| ||||||||||| || Sbjct 10023 GCCGTCACATTCAAAATGCCATTGACGTCAATGTCAAACGTGACATCAATTTGAGGCACG 9964 Query 517319 CCTCTCTGAG-CA--GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCT 517375 |||| ||| || || || || || |||| ||||| | |||| | | ||||| Sbjct 9963 CCTC---GAGGCATGGGCGGAATGCCATCCAGGTTAAACTTGCCCAAAAGGTGGTTATCG 9907 Query 517376 TTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAA 517435 || | ||||| ||||| || | ||| || ||| | | || || || | | Sbjct 9906 CGCGTCATCGAGCGTTCGCCCTCAAACACTTGAATCAAAACACCGGGCTGGTTGTCGGCA 9847 Query 517436 TAAGTTGTAAAT-ACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATT 517494 || || | ||| ||| | || ||| | |||| || || || | || | || Sbjct 9846 TACGTCGAGAATGACTGCGTCTTCTTTGCT-GGAACGGTCGTATTACGTGGGATGAGCTT 9788 Query 517495 GGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 517554 |||||| | ||||| || || || || ||||| || | || | ||||| | || | Sbjct 9787 GGTCATGACCCCACCAGCCGTCTCCAATCCAAGCGACAACGGGGCTACATCCAACAGCAA 9728 Query 517555 AATATTTTGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGCTTGAATAGCAGC 517611 || || || || ||| | |||| || | ||| || ||||| | | || Sbjct 9727 AAGATCCTGCAGCTTTGAAGACAACCCACCACCACCTAAAATTGCAGCTTGGACGGTGGC 9668 Query 517612 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 517671 |||||| || ||||| ||||| ||||||| | | |||| ||| || |||||| | Sbjct 9667 ACCATACGCCACAGCCTCATCCGGATTAATCGACTTGAACAGTTCTTTCCCGTTGAAATA 9608 Query 517672 ATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 | | | ||| || || || ||||||| ||| || ||||||| ||||| || Sbjct 9607 GTCCATCAACAATTGCTGAACTTTCGGGATACGAGTTGAGCCACCAACTAGGACAATCTC 9548 Query 517732 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 | ||| || || ||||| || || | ||||| | | || || || | Sbjct 9547 GTTCACTTGGTTCTTCGAAAGTTTGGAGTCACGCAGAACTTGTGCGACTGGCTCCATCGT 9488 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851 | | ||| ||| | ||| | || || || || | |||| || ||| | Sbjct 9487 CTTTTGAAAAAAGCTTCCACACAAGTCCTCAAAACGCGCACGCGTAATCGTCGAATTGAA 9428 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGAGTCGAAGAAGATAGTG 517910 ||| || || || || | | ||||| ||||| ||| | ||| | |||| || | | Sbjct 9427 ATCGATGCCCTCAAAAAGCGTATCAATCTCAAT-GTACGCTTGGGCGGAAGTGGACAAGG 9369 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT------TTTGCTGATT 517964 || ||||| | || || || || | || | ||||| || ||| | || Sbjct 9368 TTCGCTTAGCTCTCTCGCAAGCCGTACGAAGGCGTCGTAGAGCACGTTGGTTTCCCGA-- 9311 Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGAT 518024 ||| |||| | | ||| | |||||| || | ||| | | || ||||| | Sbjct 9310 GAT----ATCTTTGCGGTGTTTGCGCTTGAACTCGGCCACAAAATACTCCACCAGACGGT 9255 Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 | ||||||||||| || ||||| | || | || | ||||| | || | ||| | | Sbjct 9254 TGTCAAAATCTTCGCCGCCCAAGTGCGTGTCACCGGCAGTAGCCTTCACCTCGAAGATGC 9195 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | || |||| | || || | |||||| || ||||| |||| |||||| || || | Sbjct 9194 CCTCCTCAATACTCAGCAGCGATACATCGAAAGTGCCACCGCCCAGATCAAAGATGAGCA 9135 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 |||| || | | ||||| || | ||| || || | |||||||||||| || | Sbjct 9134 CATTGTGCTC---GCCACCCTTTTTGTCCAAACCGTAGGCGATAGCAGCAGCAGTCGGCT 9078 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 | || ||||| | ||| || || | ||||||||| ||| || ||||| || || || | Sbjct 9077 CGTTGATAATACGCAATACGTTCAAACCAGCAATGGCTCCGGCGTCTTTGGTCGCCTGAC 9018 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 || || |||||||| || ||||| || |||| || |||| | |||| ||||||| Sbjct 9017 GCTGCGAGTCGTTAAAGTAAGCAGGGACCGTAACCACTGCATTCTTCACTTGCTTACCAA 8958 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG-- 518382 | ||||| || | | ||| || ||| | ||| || || || | ||| || Sbjct 8957 TGTAAGCCTCCGCGATCTCGCGCATCTTGATTAGCACCATAGACGATATCTCTTCGGGCT 8898 Query 518383 GGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATT---ACCAAC 518439 |||| | ||||| || || | || || | | | ||||| || | | | Sbjct 8897 GGAACGT--CTTGGTCTCCCCTTTAAATTGCACCACCACTTGAGGTTTGTTCTCAGGACC 8840 Query 518440 ATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATC 518499 | || || || ||||||| || || || || || || | | ||| |||| | Sbjct 8839 GCGAGCGACCTTGAACGGCCAGTGCTTGATGTCCGACTGTACTTCTGGATCAGTAAACTT 8780 Query 518500 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATA 518559 | ||||| || ||||| | ||||| | |||||| | ||| || || |||||| Sbjct 8779 GCGCCCAATCAAGCGTTTGACGTCAAACACCGTATTGTGGGCATTCATGGCCACTTGATT 8720 Query 518560 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 518619 ||||| ||||| || || ||| |||| || || || || | || || || || || || Sbjct 8719 CTTGGCAGCATCACCGATTAGACGTTCCGTGTCCGTGAACGCCACGTACGACGGCGTCGT 8660 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 |||||| || || || || ||||| || || || | || ||||| ||||| || || Sbjct 8659 GCGATTTCCCTGGTCGTTGGCAATGATCTCCACACGGTCGTTCTGCCAGACACCAACGCA 8600 >seq759 Length=4314 Score = 159 bits (176), Expect = 3e-33 Identities = 907/1434 (63%), Gaps = 33/1434 (2%) Strand=Plus/Plus Query 517264 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 517323 ||| || | ||| ||||| ||||| | ||| || || || ||||| ||||| || || | Sbjct 634 CACGTTCAAAATGCCATTCGCATCGATATCGAAGGTCACGTCAATCTGAGGCACGCCAC- 692 Query 517324 CTGAG-CA--GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT 517380 ||| || |||||||| || ||||| ||||| | ||||| ||| || || || Sbjct 693 --GAGGCATTGGTGGGATACCGTCCAAGTTAAACTTGCCCAGCAAATTGTTGTCGCGTGT 750 Query 517381 GAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGT 517440 | || || || || || | ||||| ||| | | || || || | || || Sbjct 751 CATGGACCGCTCGCCTTCAAACACCTGGATCAGAACACCCGGCTGGTTGTCCGCGTATGT 810 Query 517441 TGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCAT 517500 | || | || || || || | || ||||| | |||| | | ||||| Sbjct 811 CGAGAACGTTTGCGACTTCTTGGTCGGTACAGTCGTGTTACGTGCAATCAGCGTCGTCAT 870 Query 517501 AATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATT 517560 | |||||| || || || | |||||| || | ||| || ||||| | | | | | Sbjct 871 GACACCACCAGCCGTCTCAAGACCAAGCGACAAAGGCGTCACATCCAGCAACAGCAGGTC 930 Query 517561 TTGAAGTTTTTC--ATCAGT--TTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 517616 || || || || || | | ||| ||| ||||| || || || | | |||||| | Sbjct 931 CTGTAGCTTCTCCGATGAATCGTTG-CCACTCAGAATGGCAGCCTGGACGGTAGCACCGT 989 Query 517617 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 517676 | |||||||| |||||||| |||| | | || | | || || || || || | | Sbjct 990 AGGCAACAGCCTCATCAGGGTTAATTGACTTGTTGGGCTCCTTGCCGTTAAAGAAGTCCG 1049 Query 517677 AAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 517736 | || || || ||||| || ||||| | || || ||||| | ||| | || |||| Sbjct 1050 ACAGCAGCTGCTGCACCTTGGGGATACGCGTCGACCCACCAACAAGTACCACCTCGTGCA 1109 Query 517737 CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC 517796 |||| || ||| |||| || || || || || || || || | | | Sbjct 1110 CCTGGCTCTTGGACAGCTTTGCGTCACGCAACACCTTCTCCACAGGCTCCATCGTCTTGC 1169 Query 517797 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAA 517856 || | || || | |||||||| || | || | || || |||||| Sbjct 1170 GGAAGTAATCACCGCACATATCTTCGAAACGCGCACGCGTGATGGTCGAGTTGAAATCAA 1229 Query 517857 TTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGAGTCGAAGAAGATAGTGCACGT 517915 | || ||||||| |||||||| ||||| ||| | || | ||| || || |||| ||| Sbjct 1230 TACCATCGAACAGAGAATCAATCTCAAT-GTACGCCTGTGCCGACGACGAGAGTGTACGC 1288 Query 517916 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCT 517975 || || || ||||| ||||| | ||| | || | ||| |||| || ||| | Sbjct 1289 TTTGCGCGCTCACACGCTGTACGTAGACGACGGAGGGCAC--GCTGGTTCTCCGTAATGT 1346 Query 517976 GTTTTATAT--TTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAA 518031 || | || | |||||| || | | ||| | || ||||| || ||||| Sbjct 1347 CCTTGCGGTGCTTACGCTTGAACTCCTGGGTGAA--ATGGTCTACCAGACGGTTGTCAAA 1404 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091 || ||||| ||||| | || | || | || ||| | || | |||| || ||||| Sbjct 1405 GTCCTCACCACCCAAGTGCGTGTCACCAGCTGTGGCTTTCACCTCAAAAATGCCCTCTTC 1464 Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151 || || || | || ||| ||| || || || | ||||| || || || || Sbjct 1465 AATGCTCAGTAGCGACACGTCAAAGGTACCGCCGCCAAGGTCAAAGATCAGCACGTTACG 1524 Query 518152 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 518211 ||| | | | | || || |||||||| |||| ||||||||| || ||||| || || Sbjct 1525 TTCACCGCCCT---TCTTGTCCAGACCATAGGCAATAGCAGCAGCCGTCGGTTCGTTGAT 1581 Query 518212 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 518271 ||| | | |||||||| |||||||| || || || || |||||||| | || || Sbjct 1582 AATACGGAGCACATTAAGTCCAGCAATGGCACCGGCGTCCTTGGTGGCTTGACGCTGCGA 1641 Query 518272 ATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331 || || ||||| || || || ||||| || |||| | || || || || || |||| Sbjct 1642 GTCATTGAAATAGGCCGGTACCGTAATCACTGCATTCTTCACCTCCTTGCCGATGAAAGC 1701 Query 518332 GCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--GGAATAT 518389 ||| | ||| ||| | | | ||| || || || | || || |||| | Sbjct 1702 TTCCGCCACCTCACGCATCTTAATCAGGACCATGGACGAGATCTCCTCAGGCTGGAACGT 1761 Query 518390 TGCTTGGATTCATT-TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA---T 518445 ||| || || |||| || | | || | ||| || | ||| || | | Sbjct 1762 --CTTTGACTCGCCCTTGAATTGCACCGT-AATCTGTGGCTTGTCACCGGCACCAGACGT 1818 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 |||||||||||||||| ||| | || | |||||| | |||| ||| | | ||| Sbjct 1819 GACTTTAAATGGCCAGTGCTTCGTGTCAGCTTGAACGATCGGGTCCGAAAACTTGCGACC 1878 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 ||| | || || || || || | || ||| || || || || |||| | || || Sbjct 1879 AATGAGGCGCTTGGCGTCGAACACCGTGTTGTGTGCGTTCATAGCCACTTGGTTCTTAGC 1938 Query 518566 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 518625 ||||| ||||| ||| | || || || || |||| || || || || || ||||| || Sbjct 1939 GGCATCACCAATAAGACGCTCCGTGTCCGTGAATGCCACGTAGGACGGCGTCGTGCGGTT 1998 Query 518626 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 |||||| || || |||||||| || || | || ||||| ||||| || || Sbjct 1999 ACCTTGGTCGTTAGCAATAATCTCTACGCGGTCGTTCTGCCACACACCGACGCA 2052 >seq378 Length=29730 Score = 143 bits (158), Expect = 2e-28 Identities = 422/641 (66%), Gaps = 21/641 (3%) Strand=Plus/Minus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 ||||| ||||| || ||||| | |||| || ||| || |||| || | ||| Sbjct 6346 TCAAAGTCTTCTCCGCCCAAATGCGTATCCCCGTTCGTTGCCAAGACTTCAAACACACCA 6287 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 | || | | || | || |||||| |||||| ||||| | |||||| | || ||| Sbjct 6286 CCATCGATCGCCAGCAACGTCACATCAAAGGTTCCTCCACCTAGATCAAAGACCAGCACA 6227 Query 518147 TTCATTTCTTTGTCTTGG---TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 ||| | ||| |||| || || |||| ||||| |||| ||||||||| || ||| Sbjct 6226 TTCTTCTCTC---CTTGAGCCTTCTTGTCAATGCCATAGGCAATAGCAGCAGCTGTCGGT 6170 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 |||||||| || | ||| | ||||||||||| | || ||||| || || ||||| Sbjct 6169 TCATTAATGATCCGTTGAACGGTCAGACCAGCAATGGTACCAGCATCCTTTGTAGCTTGA 6110 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 | ||| | |||||||| || ||||| || || | ||| |||||| ||||| |||| Sbjct 6109 CGTTGAGCGTCGTTAAAGTAAGCAGGGACTGTCACAACAGCATCAAACACTTCACGACCA 6050 Query 518324 ATATAAGCGCTTGCCG---TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380 || || | | ||| | || ||||| || | || | ||| | || | || ||| Sbjct 6049 ATGTA---TCCTTCCGAAATCTGCTTCATCTTTGTCAAGACCATGGCAGAGACTTCTTCA 5993 Query 518381 GGGGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 518439 || | | |||| | | | |||| | | |||| || | | ||||| | | Sbjct 5992 GGAGCAAATTGACGTTTCTCACCCTTGACA-GTCACTTGAATAAAAGGTTTTCCATCTTT 5934 Query 518440 ATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAAC--ACTTTGGTCATTAAAA 518497 |||||| | || | | ||| | | || | || ||||| || |||| |||||| | Sbjct 5933 ATTAATGAGTTCATAAGGCAACAACTTTTTGTCCGATTGGACCGACTT--GTCATTGTAT 5876 Query 518498 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGA 518557 | | |||||| | || || |||| || | || || |||||||| | ||||||| Sbjct 5875 TTACGACCAATCAGACGCTTGACATCGAACAACGTCTTCTCCGGATTAATCGTAGCTTGA 5816 Query 518558 TATTTGGCTGCATCTCCAATCAGATGTTC--TGTCTCTGT-AAATGAAACATATGATGGA 518614 | || || |||| ||||||| | | || || || | | ||| || || || Sbjct 5815 TTCTTTGCACCATCACCAATCAAACGCTCATCGTTCGAGTCCCAAGCAACGTAAGAAGGC 5756 Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTT 518655 || | ||||||||||||||||| ||||| || ||||| || Sbjct 5755 GTGATACGATTACCTTGATCATTGGCAATGATCTCAACCTT 5715 >seq3361 Length=54802 Score = 136 bits (150), Expect = 3e-26 Identities = 458/704 (65%), Gaps = 22/704 (3%) Strand=Plus/Plus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || ||||| || ||||| ||||| | || | || ||||| | || | || | Sbjct 18716 TTGTCAAAGTCCTCACCACCCAAGTGCGTGTCACCACCCGTAGACTTGACCTCAAAGATA 18775 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 |||| ||| | || | | | ||||||| ||| |||||||||| |||||||| || Sbjct 18776 CCATTTTCGATCGAAAGGATTGATACATCAAAGGTACCACCACCCAAGTCAAAAATCAGA 18835 Query 518144 ACATT------CATTTCTT---TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 ||||| | || | | || | ||| |||| |||||||| |||| |||||| Sbjct 18836 ACATTGCACACCTTTCCATCCGTGCCAGCGTTCGTATCTAGACCATAGGCAAGGGCAGCA 18895 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 || || ||||||||||| || | |||| ||||||||||| || |||||||| Sbjct 18896 GCCGTCGGTTCATTAATGATACGTTTGACATCCAGACCAGCAATCGAACCAGCATCTTTG 18955 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 || | ||| | ||| ||||| ||||| ||||| ||||||| ||| || | | | Sbjct 18956 GTAGATTGACGCTGTTGGTCGTTGAAATAAGCAGGTACAGTAACAACAGCCTGTGAGATG 19015 Query 518315 TCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374 | ||||| | |||| ||| |||| ||||| || | ||| || || || Sbjct 19016 GTCTGACCAAGAAAAGCTTCTGCTGTTTCCTTCATACGTAGTAGCACCATCGACGAGATC 19075 Query 518375 TGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATT 518433 | ||| || | | | ||| ||| |||| | | || || ||| || || Sbjct 19076 TCTTCAGGAGTAAAACTCTTCTTTTCTCCCTTGAACTCA-ACCTC--AATCAGG-ACCTT 19131 Query 518434 ACCAACAT-TAATAACTT-----TAAATGGCCAGTATTTCATATC-TGATTGAACACTTT 518486 | || | | | | ||| ||||||| ||| ||| ||| | |||| ||| || Sbjct 19132 ATCATCGTCTCCTTCCTTGATGGTAAATGGAAAGTGTTTTGCATCTTTCTTGACCAC-TT 19190 Query 518487 GGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAA 518546 ||| |||| | ||||| | ||||| |||||||| | || || || | |||| Sbjct 19191 CATCACTAAAGCTGCGTCCAATGATACGTTTGGCATCAAACACCGTGTTCGTAGCATTAC 19250 Query 518547 TTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACAT 518606 || |||||| || ||||| || ||||| ||| |||| | || | |||| ||| Sbjct 19251 CAGCTGCTTGAATCTTAGCTGCTTCACCAATGAGACGTTCACTTTCATTGAATGCAACCC 19310 Query 518607 ATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCC 518666 |||| || || || || || || | | ||| ||||| || || || | ||||| || || Sbjct 19311 ATGAAGGGGTCGTACGGTTTCCCTCACTATTGGCAATGATCTCCACCTGACCATCTTTCC 19370 Query 518667 ATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 518710 | ||||| |||||| | || || || | ||||||||||||| Sbjct 19371 ACACACCCACACAAGAGTACGTAGTACCAAGATCAATACCAATA 19414 >seq3540 Length=47434 Score = 102 bits (112), Expect = 6e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | |||||| |||| |||||||| || |||||||| || || | | || | Sbjct 19374 TTGTCCATACCATAGGCAAGGGCAGCAGCTGTAGGTTCATTGATGATCCGAAGTACGTCC 19433 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 |||||||||||| | || ||||| ||||| ||||| | |||||| || |||||||| || Sbjct 19434 AGACCAGCAATTTTACCAGCATCCTTAGTAGCTTGACGTTGTGAGTCATTAAAATAAGCC 19493 Query 518288 GGAACAGTAATAACGGCATCAGTTAC 518313 || || |||| || || | |||||| Sbjct 19494 GGTACCGTAACCACAGCTTGAGTTAC 19519 Score = 93.3 bits (102), Expect = 3e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 ||| || ||||| || || || || |||||||| || || ||| || || | ||| || Sbjct 19382 ACCATAGGCAAGGGCAGCAGCTGTAGGTTCATTGATGATCCGAAGTACGTCCAGACCAGC 19441 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 ||||||| ||| ||| ||| ||||| | |||| |||||||||||| || ||||| || Sbjct 19442 AATTTTACCAGCATCCTTAGTAGCTTGACGTTGTGAGTCATTAAAATAAGCCGGTACCGT 19501 Query 322363 AATAACTGCTTTATTAATAGGTTT 322386 || || |||| | | | |||||| Sbjct 19502 AACCACAGCTTGAGTTACAGGTTT 19525 >seq383 Length=17096 Score = 89.7 bits (98), Expect = 4e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 || ||||| ||||| ||| | || ||||||||||| || ||||| ||| | || || ||| Sbjct 1374 GGCAAAGAGGGTCGCATTCGTGGGAATTTGATGGGCAAGCGTGTGGATTTTTCGGCGCGT 1433 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTC 668966 || || |||||| | || || || |||||| || || |||| ||||| |||| Sbjct 1434 ACGGTGATTACTGCCGACCCTAACATTGCTATCGATCAAGTGGGTGTACCTC 1485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780622914358120