Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245735.1_202017-08-10] 4,020 sequences; 24,880,192 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 5e-12 >seq5 Length=21317 Score = 86.0 bits (94), Expect = 5e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 107669 GGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGA 107728 ||| ||||| | || || | ||| ||||| ||||||||||| | | || | ||||| Sbjct 17406 GGACCAGCAACGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACGTTAGCGGA 17465 Query 107729 CTACAACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||||||||||||||||||| || |||||| ||||| Sbjct 17466 CTACAACATTCAAAAGGAGTCAACCTTGCACTTGGTG 17502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398857257529780