Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245735.1_202017-08-10] 4,020 sequences; 24,880,192 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq759 372 9e-98 seq1193 358 2e-93 seq378 246 9e-60 seq3361 237 5e-57 seq185 149 2e-30 seq3868 132 1e-25 seq168 109 2e-18 seq1219 89.7 2e-12 seq5 87.8 5e-12 seq3569 84.2 7e-11 seq3540 84.2 7e-11 >seq759 Length=4314 Score = 372 bits (412), Expect = 9e-98 Identities = 972/1471 (66%), Gaps = 16/1471 (1%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||| | ||||| || || || || || | ||| ||||| || || || ||||| Sbjct 2079 GGCATTGATCTCGGTACGACGTACTCGTGCGTCGGTGTGTGGCAGAACGACCGCGTAGAG 2020 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| || || ||||||||| | || ||||| || ||||| ||||| || || || Sbjct 2019 ATTATTGCTAACGACCAAGGTAACCGCACGACGCCGTCCTACGTGGCATTCACGGACACG 1960 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 |||||| | ||||||||| | || || || |||| ||| || || | || ||||| Sbjct 1959 GAGCGTCTTATTGGTGATGCCGCTAAGAACCAAGTGGCTATGAACGCACACAACACGGTG 1900 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAA-ATCTACACAATCTGATCT 349443 || || || ||||| || |||||| | | ||||| ||| ||| ||| |||| Sbjct 1899 TTCGACGCCAAGCGCCTCATTGGTCGCAAGTTTTCGGACCCGATCGTT-CAAGCTGACAC 1841 Query 349444 AAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGA 349503 || || | || |||| || | | |||||| || ||| ||| ||| | Sbjct 1840 GAAGCACTGGCCATTTAAAGTCACGTCTGGTGCCGGTGACAAGCCACAGATTACGGTGCA 1781 Query 349504 ATATAAAGGTGAA-CAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTA 349562 || || || || |||| || || || || || || || || ||||| | ||| Sbjct 1780 ATTCAAGGGCGAGTCAAAGACG-TTCCAGCCTGAGGAGATCTCGTCCATGGTCCTGATTA 1722 Query 349563 AAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTG 349622 | ||| || | || ||||| | | || | || | |||| || ||||| | Sbjct 1721 AGATGCGTGAGGTGGCGGAAGCTTTCATCGGCAAGGAGGTGAAGAATGCAGTGATTACGG 1662 Query 349623 TACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGG 349682 |||| |||||||| ||||| | |||||| || || || || || || |||||| | Sbjct 1661 TACCGGCCTATTTCAATGACTCGCAGCGTCAAGCCACCAAGGACGCCGGTGCCATTGCTG 1602 Query 349683 GGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTG 349742 | | ||||| || | || || || ||||| || ||||| || ||||| ||||| || | Sbjct 1601 GACTTAATGTGCTCCGTATTATCAACGAACCGACGGCTGCTGCTATTGCCTATGGTCTGG 1542 Query 349743 ATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTG 349802 | || | | | | ||| || | || || ||||| | || || ||||| |||| Sbjct 1541 ACAAGAAGGGCGGT---GAACGTAACGTGCTGATCTTTGACCTTGGCGGCGGTACCTTTG 1485 Query 349803 ATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATA 349862 | || || ||||| | |||||||||| |||||||| || ||||| || |||||||| | Sbjct 1484 ACGTGTCGCTACTGAGCATTGAAGAGGGCATTTTTGAGGTGAAAGCCACAGCTGGTGACA 1425 Query 349863 CACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTA 349922 | || | ||||| || || ||||| || ||||| || ||||| | || || | Sbjct 1424 CGCACTTGGGTGGTGAGGACTTTGACAACCGTCTGGTAGACCATTTCACCCAGGAGTTCA 1365 Query 349923 AGCGTCAAGCTAAA-ATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACT 349981 ||||| |||| | || ||| || || | | || | ||||| ||| | || Sbjct 1364 AGCGT-AAGCACCGCAAGGACATTACGGAGAACCAGCGTGCCCTCCGTCGTCTACGTACA 1306 Query 349982 GCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGAT 350041 |||||||| || || |||||| | | || || | | || | | ||||| |||||| Sbjct 1305 GCGTGTGAGCGCGCAAAGCGTACACTCTCGTCGTCGGCACAGGCGTACATTGAGATTGAT 1246 Query 350042 TCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTA 350101 ||||| ||||| | |||||| || | || || ||||| || || ||||| || Sbjct 1245 TCTCTGTTCGATGGTATTGATTTCAACTCGACCATCACGCGTGCGCGTTTCGAAGA--TA 1188 Query 350102 TGTATGGATCTTTTTAGAGCA--ACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAA 350159 ||| || || | ||| || ||||| |||||||| || || || || |||| Sbjct 1187 TGTGCGGTGATTACTTCCGCAAGACGATGGAGCCTGTGGAGAAGGTGTTGCGTGACGCAA 1128 Query 350160 AAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAA 350219 | ||||||| | ||| | | || || || | |||||||| || || ||||| || | Sbjct 1127 AGCTGTCCAAGAGCCAGGTGCACGAGGTGGTACTTGTTGGTGGGTCGACGCGTATCCCCA 1068 Query 350220 AAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATC 350279 | || || ||| | || || || || ||||| ||||| || || | |||||||| | Sbjct 1067 AGGTGCAGCAGCTGCTGTCGGACTTCTTTAACGGCAAGGAGCCCAACAAGTCAATTAACC 1008 Query 350280 CAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGA 350339 | ||||| |||||||| || |||||| | || ||||| | ||| | ||| || | Sbjct 1007 CTGATGAGGCTGTTGCCTACGGTGCTACCGTCCAGGCTGCCATTCTGAGTGGCAACGATT 948 Query 350340 GTTC---TAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAG 350396 || || | | || || | | || ||||| || || | |||||||| | | Sbjct 947 CATCGGAGAAGCTACAGGACCTGCTGTTGCTGGATGTGACGCCTTTGTCGCTTGGTCTTG 888 Query 350397 AAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAA 350456 | || |||||| || ||||| || ||| | | || | |||||||| || || | Sbjct 887 AGACGGCTGGTGGTGTCATGACGACGCTGATTGCACGTAACACGACTGTACCGACCAAGA 828 Query 350457 AGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTG 350516 |||| ||||| || || |||| || || || ||||| | || || || || |||| Sbjct 827 AGTCGCAAACGTTCTCGACATACGCGGACAACCAGCCGGGTGTTCTGATCCAGGTGTTTG 768 Query 350517 AAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAA 350576 |||| || || | || || || ||| || || | |||| | | | | Sbjct 767 AAGGCGAGCGGTCCATGACACGCGACAACAATTTGCTGGGCAAGTTTAACTTGGACGGTA 708 Query 350577 TTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATG 350636 | |||||||||||| | || || ||||||||||| || | |||||||| ||| | |||| Sbjct 707 TCCCACCAATGCCTCGTGGCGTGCCTCAGATTGACGTGACCTTCGATATCGATGCGAATG 648 Query 350637 GTATTTTAAATGTTACCGCAGTTGAAAAATC 350667 | ||||| || || | || || || || || Sbjct 647 GCATTTTGAACGTGTCGGCTGTGGAGAAGTC 617 >seq1193 Length=14559 Score = 358 bits (396), Expect = 2e-93 Identities = 982/1485 (66%), Gaps = 26/1485 (2%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || ||||| | ||||| || || || || |||| ||| ||||| || || ||||| || Sbjct 8573 GGTATCGACCTGGGTACGACGTACTCGTGCGTTGGTGTCTGGCAGAACGACCGTGTGGAG 8632 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| || || || || || | || ||||| || ||||| || || || || || Sbjct 8633 ATCATTGCCAACGACCAGGGAAATCGCACGACGCCGTCGTACGTGGCGTTCACGGACACG 8692 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 || ||| | || |||||| |||| || ||||||| || ||| | | |||||||| Sbjct 8693 GAACGTCTAATCGGTGATGCTGCCAAGAATCAAGTGGCCATGAATGCCCACAATACGGTG 8752 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAATCTGATC 349442 ||||| | || || | ||||| | | ||| |||| || | |||| || || Sbjct 8753 TTTGACGTCAAACGCTTGATTGGGCGCAAGTTTACTGATCCAGAAGTACAG--TCGGACA 8810 Query 349443 TAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTG 349502 | || || | || || | || | || | | ||||| | | ||| Sbjct 8811 TCAAGCACTGGCCGTTCAAGGTCGCTCGCGGTCCTGAGAACAAACCTCAAGTGGTGGTGC 8870 Query 349503 AATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTT 349561 ||| |||||| || || || || || |||||||| || || || ||||| || | Sbjct 8871 AATTTAAAGGGGAGACCAAGACG-TTCCAGCCCGAAGAGATATCGTCTATGGTGCTAATC 8929 Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || ||| || || || || || || | ||| | ||| | |||| || |||| Sbjct 8930 AAGATGCGCGAGATCGCGGAGGCTTACATTGGTAAGCAAGTGAAGAATGCAGTGGTTACG 8989 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || || || ||||| || | |||||| || || ||||| || || |||||| Sbjct 8990 GTCCCTGCTTACTTTAACGACTCGCAGCGTCAGGCGACCAAAGACGCCGGAGCCATTGCT 9049 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || || || || | | || || || || || |||||||| || || || || || | Sbjct 9050 GGTTTGAACGTATTGCGTATTATCAACGAGCCGACTGCTGCTGCTATCGCCTACGGTTTG 9109 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 || |||| | ||| | || | ||| | || || |||||| | || ||||| ||||| Sbjct 9110 GACAAAAAGGGTGGC---GAGCACAATGTGCTCATCTTTGATCTGGGCGGTGGCACTTTC 9166 Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861 |||||||| || || | |||| ||||| || || || || || || ||||| ||||| Sbjct 9167 GATGTATCGCTGCTGAGTATTGAGGAGGGCATCTTCGAGGTGAAGGCTACTGCCGGTGAC 9226 Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTT 349921 || || | || || ||||||||||| || ||||| || | ||||||| || || Sbjct 9227 ACGCACTTGGGCGGCGAAGATTTTGACAACCGTCTGGTGGAGTATTTTGTGGCCGAGTTC 9286 Query 349922 AAGCGTCA--AGCTAAAATTGATAT-TGGAGATAATCCTAGAGCAATGCGTCGCCTAAGA 349978 ||||| | | | ||| ||||| | | || || | | || | || ||||| | Sbjct 9287 AAGCGCAAACACCGCAAA--GATATCTCGGGA-AACCAACGTGCTCTACGACGCCTTCGT 9343 Query 349979 ACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATT 350038 || || || || | |||||||| |||| || || | ||||| | | ||||| ||| Sbjct 9344 ACGGCTTGCGAGAGAGCTAAGCGAACCTTGTCCACTTCCGCCCAAGCGTACATTGAGATT 9403 Query 350039 GATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAA 350098 ||| | ||| ||| |||| |||||| ||| | ||||| ||||| || ||||| || Sbjct 9404 GATACGCTTTTTGAGGGCATCGATTTCAATTCGACGATTACGCGTGCGCGTTTTGAGGAC 9463 Query 350099 TTATGTATGGATCTTTTTAGAGCA-ACAATGGATCCTGTGGAAAAAGTATTAAAAGATGC 350157 || ||| | | |||||| | | || ||||| || || | | |||| | || | Sbjct 9464 TTGTGT-GGAAGCTTTTTTCAAAAGACGATGGAGCCAGTCGCACAAGTTCTGCGTGACTC 9522 Query 350158 AAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCC 350217 ||| | || || || || | | || | || |||||||||| || || ||||| || Sbjct 9523 CAAACTTTCGAAGAACCAAGTGAACGAGATTGTCCTAGTTGGTGGCTCAACTCGTATCCC 9582 Query 350218 AAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAATTA 350276 |||||||| || || | || | ||| || || ||||||| ||| || || |||| Sbjct 9583 GAAAGTTCAGCAATTGTTGATGGACTATTTCAACGGGAAAGAACTGTTCAAG-TCGATTA 9641 Query 350277 ATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATA 350336 |||| ||||| ||||| || |||||||| | || || || | |||||| ||| | Sbjct 9642 ATCCGGATGAGGCTGTGGCGTATGGTGCCACCGTCCAAGCTGCAATTTTAGGTGGTGGTG 9701 Query 350337 AGAGTTCT--AAAATTG-ATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGAT 350393 | ||| ||| || | ||||| || || | |||||| | || | |||||||||| Sbjct 9702 GGTTGTCTTCAAAGCTGCAGGATCTTTTGCTGTTGGATGTAGCCCCGTTGTCGCTTGGAT 9761 Query 350394 TAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAA 350453 | || || |||||| || ||||| || || || | |||| || || || ||| Sbjct 9762 TGGAGACGGCTGGTGGGGTCATGACCAAGCTCATCCCACGTAATACGACCGTTCCAGCAA 9821 Query 350454 AAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTAT 350513 | ||| | || | || || || | ||| || || ||||| | || |||||||| | Sbjct 9822 AGAAGACGCAGTCATTCTCGACGTATGCCGACAACCAGCCCGGTGTTTTGATTCAAGTGT 9881 Query 350514 TTGAAGGTGAACGTGCTCG--CACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAG 350571 |||| || |||| ||||| || ||||| | | || | |||| ||| Sbjct 9882 TTGAGGGCGAAC--GCTCGATGACGCGCGATAACCACCTTTTGGGCAAGTTTAACCTGGA 9939 Query 350572 TGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTC 350631 || ||||| || |||||| |||| || ||||| ||||| ||| | || || ||||| Sbjct 9940 TGGCATTCCGCCCATGCCTCGAGGCGTGCCTCAAATTGATGTCACGTTTGACATTGACGT 9999 Query 350632 AAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAA 350676 ||||| ||||| ||||| || || ||||||| || | ||| || Sbjct 10000 CAATGGCATTTTGAATGTGACGGCGATTGAAAAGTCGACTGGCAA 10044 >seq378 Length=29730 Score = 246 bits (272), Expect = 9e-60 Identities = 717/1078 (67%), Gaps = 42/1078 (4%) Strand=Plus/Plus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTT-AC 349317 || || || ||||| |||||||||||||| | | ||||| || |||||||| | || Sbjct 5718 GTTGAGATCATTGCCAATGATCAAGGTAATCGTATCACGCCTTCTTACGTTGCTTGGGAC 5777 Query 349318 CGAAAC--TGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAA 349375 ||| ||||||| ||||||||||| |||||| ||||||||| | |||||| | Sbjct 5778 TCGAACGATGAGCGTTTGATTGGTGATGGTGCAAAGAATCAAGCTACGATTAATCCGGAG 5837 Query 349376 AATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAA 349435 || ||| | || |||| ||||| || |||||| | | | |||||| || ||| Sbjct 5838 AAGACGTTGTTCGATGTCAAGCGTCTGATTGGTCGTAAATACAATGACAAGTCGGTCCAA 5897 Query 349436 TCTGATCTAAAACATTTT-CCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 || || | |||| | || |||| | | || ||||| || ||||| |||| Sbjct 5898 TCGGA-CAAAAAGTTGTTGCCTTATGAACTCATTAATAAAGATGGA---AAACCTTTTAT 5953 Query 349495 TGAGGTTGAATATAAAGG-TGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGG 349553 | | || || | | |||| ||| || |||||| || |||||| | || | |||| Sbjct 5954 TCAAGT-GACTGTCAAGGGTGAGAAACGTCAATTTGCTCCTGAAGAAGTCTCTGCCATGG 6012 Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613 | || || |||||| | ||| | |||| ||| | ||| ||| |||||||| Sbjct 6013 TCTTGACAAAGATGAAGCAGATTTCGGAAGGATACATTGGTCGTGAAGTGTTTGATGCTG 6072 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 || | || || || || || ||||| || || || ||| || ||||| |||||||| | Sbjct 6073 TTGTGACAGTCCCTGCTTACTTTAACGACGCTCAACGTCAAGCTACAAAGGATGCTGGTA 6132 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 |||||| || | | |||| | | || ||||||||||| || ||||| || ||||| | Sbjct 6133 CCATTGCTGGTCTGACCGTTCAACGGATCATTAATGAACCGACAGCTGCTGCTATTGCCT 6192 Query 349734 ATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTG 349793 |||| |||| || | | | | ||| || ||| | || | |||||| ||||||| | Sbjct 6193 ATGGCATTGACAAGAAGGCTCAAGGAGAGAAGAATGTGCTGGTCTTTGATCTAGGTGGAG 6252 Query 349794 GTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTG 349853 | || |||||||| | | || | | || | || | |||||||| ||||| Sbjct 6253 GAACCTTTGATGTGACGTTGCTGGCGATCGATGGTGGTGTGTTTGAAGTCTTGGCAACGA 6312 Query 349854 CTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTA 349913 || ||||| ||| | || |||||||| ||||| | || || | | | ||| | | Sbjct 6313 ACGGGGATACGCATTTGGGCGGAGAAGACTTTGACCAACGGATCATGCAGTACTTTATCA 6372 Query 349914 AAGAATTTAAG--CGTCAAGCTAAAATTGATATTGGAGATAATCCTA-GAGCAATGCGTC 349970 | | | ||| | |||| || |||||||| | ||| | ||| | |||| Sbjct 6373 AGAAGTGGAAGAAAGACAAG--AACATTGATAT-----CTCATCGGACAAGCGA-GCGTT 6424 Query 349971 GCCTAAGA-ACTGCGTG----TGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAAC 350025 || |||| | |||| ||||||| || ||| | | || || | | | || Sbjct 6425 GCAGAAGATTCGTCGTGAAGCAGAACGTGTGAAACGTGCGCTGTCTGCT-CAAGCTCAAG 6483 Query 350026 CTC-TATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCA---TCTATTACA 350080 ||| | |||||||||| || ||||| ||||| ||| |||| || ||| | | Sbjct 6484 CTCGTCTTGAAATTGAATC-GTTGCTGGATGG---AGAGGACTTTACAGAGTCTTTGAGT 6539 Query 350081 CGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCA-ACAATGGATCCTGTGGA 350139 ||||| || || || | || | |||| | |||| || | ||| | | ||||||||| Sbjct 6540 CGTGCACGTTTCGAGAAGCTAAATGAGGATTTGTTTA-AGAAGACACTTGGTCCTGTGGA 6598 Query 350140 AAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGA--TTGATGAAGTAGTTTTAGTT 350197 || || | || || || | || | || || || ||||||| | || || ||| Sbjct 6599 GAAGGTGATGAAGGACGC--GGACCTCAAGAAGTCGGAAGTTGATGAGATTGTGTTGGTT 6656 Query 350198 GGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAA 350257 |||||||| || ||||| || || || || || || | || | |||||||||||| Sbjct 6657 GGTGGTTCGACCCGTATCCCCAAGGTCCAGCAATTGATCAAGGATTACTTTAATGGCAAA 6716 Query 350258 GAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGG 350315 ||||| || | | ||||| |||||||||||||| || |||||||||||||||| Sbjct 6717 GAACCGTCGCGTGGTGTGAATCCTGATGAAGCTGTTGCTTACGGTGCTGCTGTTCAGG 6774 >seq3361 Length=54802 Score = 237 bits (262), Expect = 5e-57 Identities = 478/704 (68%), Gaps = 19/704 (3%) Strand=Plus/Minus Query 349201 TATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGT 349260 ||| || || ||| | |||||||| || |||||||| | ||| ||| || ||| || || Sbjct 19414 TATTGGTATTGATCTTGGTACTACGTACTCTTGTGTGGGTGTGTGGAAAGATGGTCAGGT 19355 Query 349261 AGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGA 349320 || || ||||| ||| | | || ||| | || || || |||| |||||||| | || Sbjct 19354 GGAGATCATTGCCAATAGTGAGGGAAACCGTACGACCCCTTCATGGGTTGCATTCAATGA 19295 Query 349321 AACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATAC 349380 || ||| ||| | |||||||| | || || | |||||| |||| |||| | | || || Sbjct 19294 AAGTGAACGTCTCATTGGTGAAGCAGCTAAGATTCAAGCAGCTGGTAATGCTACGAACAC 19235 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAA----TCTACACAAT 349436 ||| |||||||| || || | ||||| | || ||| ||| || || | | | Sbjct 19234 GGTGTTTGATGCCAAACGTATCATTGGACGCAGCTTTAGTGATGAAGTGGTCAAGAAA-- 19177 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 ||| |||||| ||||| ||||| | | ||||| |||||| | |||| Sbjct 19176 --GATGCAAAACACTTTCCATTTACCATCAAGGAAGGAGACGATGATAAGGTCCTGATTG 19119 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTT 349555 ||||||| | || || ||| || || | |||| || ||||| || || || ||||| Sbjct 19118 AGGTTGAGTTCAAGGGAGAA-AAGAAGAGTTTTACTCCTGAAGAGATCTCGTCGATGGTG 19060 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 || | |||||||||| || ||||| | | | ||| | || | | | |||||| Sbjct 19059 CTACTACGTATGAAGGAAACAGCAGAAGCTTTTCTTGGTCAGACCATCTCACAGGCTGTT 19000 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 |||||||||| || ||||| || || |||||| | || ||||||||||| Sbjct 18999 GTTACTGTACCTGCTTATTTCAACGACCAACAGCGTCAATCTACCAAAGATGCTGGTTCG 18940 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||||| || | |||| | | || ||||||||||| || ||||| || |||| ||| Sbjct 18939 ATTGCTGGTCTGGATGTCAAACGTATCATTAATGAACCGACGGCTGCTGCCCTTGCCTAT 18880 Query 349736 GGGCTTGATA--AAATGAGTGACCAA--Gaaa-----aaaaTATTCTTATTTTTGATTTA 349786 || || |||| || | || | |||| ||| |||| |||||||| || Sbjct 18879 GGTCTAGATACGAACGCTGGCACGGATGGAAAGGTGTGCAATGTTCTGATTTTTGACTTG 18820 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAA 349846 ||||||||||| |||||||||||| | || | | ||| | || || ||||| || || Sbjct 18819 GGTGGTGGTACCTTTGATGTATCAATCCTTTCGATCGAAAATGGTATCTTTGAGGTCAAG 18760 Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 | || | |||||| || || | ||||| || || ||||| || Sbjct 18759 TCTACGGGTGGTGACACGCACTTGGGTGGTGAGGACTTTGACAA 18716 Score = 84.2 bits (92), Expect = 7e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 ||||| || |||||||| || || || || ||| | |||| || || ||||| || || Sbjct 18719 TCAAAGTCCTCACCACCCAAGTGCGTGTCACCACCCGTAGACTTGACCTCAAAGATACCA 18778 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 | ||| || | |||||||||||||| |||||||||||||| |||||| Sbjct 18779 TTTTCGATCGAAAGGATTGATACATCAAAGGTACCACCACCCAAGTCAAAA 18829 >seq185 Length=10224 Score = 149 bits (164), Expect = 2e-30 Identities = 209/291 (72%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAA 206508 ||||| | ||||| || || | ||||| || | || ||| ||||| || || ||||| Sbjct 2074 TGGTCCACGTATCGGGCCGTGTCGTTAAACACCCGTAACATGGGAATGATCCCGTTAGAG 2015 Query 206509 GTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATATGTAAT-CC 206567 | ||||| || || | ||||| ||| ||| ||| || || || ||| |||| || Sbjct 2014 GAACCATTAGTGCCACGAATATAGCTGTTAGTGGCTCGTATGTTGTGCATAC-TAATGCC 1956 Query 206568 AATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCATC 206627 ||| || || |||||||| ||||| ||||||| || ||||| | |||||| || || Sbjct 1955 AATCCCACCAGCCCATTTGGAAATGCACGCACATTGCTTCAATGTGTCATAAATACCTTC 1896 Query 206628 AACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTTCC 206687 || |||| | |||||| | ||||||||| || | ||| || || || ||||| Sbjct 1895 AATCGAATCATCCTGCATAGCTAGTAAAAAACACGAGGACAGTTGGGGGCGAGGAGTTCC 1836 Query 206688 AGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAA 206738 ||||||||| || || || || ||||| |||||| | || |||||||| || Sbjct 1835 AGCATTAAACAACGTTGGCGTCGCATGAGTAAAAAACTTCTGAGACATCAA 1785 >seq3868 Length=24320 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || |||||||| || || || | ||| || |||||||| || || || ||||||||||| Sbjct 11102 TTCTGAATATTGTAGTCCGAAAGTGTACGGCCATCTTCCAGCTGCTTGCCAGCAAAGATC 11043 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| ||| Sbjct 11042 AGACGTTGCTGGTCAGGTGGAATACCTTCCTTGTCCTGGATTTTCTGCTTGACATTGTCA 10983 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | || || || || || || | |||| ||||| || || | || || ||||| Sbjct 10982 ATGCAGTCGGACGGCTCCACGTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTCACAAAG 10923 Query 140730 ATCTGCAT 140737 |||||||| Sbjct 10922 ATCTGCAT 10915 >seq168 Length=28903 Score = 109 bits (120), Expect = 2e-18 Identities = 192/280 (69%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 130729 CAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATAT 130788 |||| | ||| || |||||||| ||||| || ||||| || ||||| || || || | | Sbjct 14967 CAGCGAGCATGCCACCAAGCATGACAAAGTCTGCTCCAGCACCAAACGCCTTAGCCACGT 14908 Query 130789 CCCCGGGAGATTTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCAT 130848 | || ||| | |||| || || ||||| || || || ||||| | || || || | || Sbjct 14907 CACCCGGACACGTACAGCCACCGTCAGCGATCACGTGACCATTAAGACCGTGAGCAGAAT 14848 Query 130849 CAGCACACTCTGAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTTTTCTTGTAG 130908 | || || || | ||||| || || || || || || || || ||| | || | Sbjct 14847 CCGCGCATTCCAGCACTGCAGACAGCTGCGGGTAGCCTACACCCGTCTGTTTGCGGGTGG 14788 Query 130909 TACAAACAGCACCTGGACCAATACCAATTTTAACAATATCAGCTCCTGCTAAAATTAGTG 130968 | || || | || |||||||| || | || |||||||||||||| | | | | | Sbjct 14787 TGCACACGGAGCCCGGACCAATGCCCACCTTGACAATATCAGCTCCCGACAGCAGCAATT 14728 Query 130969 CTTCGGTCATTTCTCTAGTAGCCACATTACCTGCTATGAT 131008 | ||| ||| || | |||| ||||||| || || ||||| Sbjct 14727 CCTCGACCATCTCCCCAGTAACCACATTTCCGGCAATGAT 14688 >seq1219 Length=1016 Score = 89.7 bits (98), Expect = 2e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 74488 GTGGGATTCGAACCCACGAGTCTTACGACAGTAGAACTTGAGTCTACCCCCTTAGACCAC 74547 |||||||| |||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 386 GTGGGATTTGAACCCACGAGTGCGAACACAGTAGAACTTGAGTCTACCCCCTTAGACCGC 445 Query 74548 TCGGGCA 74554 ||||||| Sbjct 446 TCGGGCA 452 >seq5 Length=21317 Score = 87.8 bits (96), Expect = 5e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | ||| || | || | || ||||| |||||||| || || || | | Sbjct 17519 CCACCACGAAGACGTAGCACCAAGTGCAAGGTTGACTCCTTTTGAATGTTGTAGTCCGCT 17460 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 || || || ||||| || || || || ||||||||||| ||||||||||| || || || Sbjct 17459 AACGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCCGGGGGG 17400 Query 140631 ATTCCT 140636 |||||| Sbjct 17399 ATTCCT 17394 >seq3569 Length=50395 Score = 84.2 bits (92), Expect = 7e-11 Identities = 99/132 (75%), Gaps = 4/132 (3%) Strand=Plus/Plus Query 266272 ATACTCATTGTGAAATTCATCCAAGTACATTATTA--GGTATTTTAGCATCTTGTATTCC 266329 |||||||||| |||||||| || || ||| ||| ||||||| || | |||||| Sbjct 20545 ATACTCATTGCGAAATTCACCC--GTCCATGATTTTGGGTATTTGTGCCAGTATTATTCC 20602 Query 266330 ATTTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGGTAAACAGGC 266389 ||| || || || ||||| | || ||| || ||||| | ||| |||||||| ||||| Sbjct 20603 ATTCCCCGATCACAATCAGTCGCCGCGTAACACGTATCAGTCTGCTATGGGTAAGCAGGC 20662 Query 266390 TATGGGTATCTA 266401 ||||||||| || Sbjct 20663 TATGGGTATTTA 20674 >seq3540 Length=47434 Score = 84.2 bits (92), Expect = 7e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| | ||||| | || | || || | |||||| | ||||| |||| Sbjct 19558 AAGATGAAGGAGACGGCTGATGGATTCCTGGGCAAACCTGTAACTCAAGCTGTGGTTACG 19499 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 ||||| || ||||||||||| | || ||| || || || |||||||| | ||||| Sbjct 19498 GTACCGGCTTATTTTAATGACTCACAACGTCAAGCTACTAAGGATGCTGGTAAAATTGCT 19439 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 || | | || || | || || |||||||| || ||||| || |||| ||||| Sbjct 19438 GGTCTGGACGTACTTCGGATCATCAATGAACCTACAGCTGCTGCCCTTGCCTATGG 19383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515176354928060