Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1113 98.7 8e-16 >seq1113 Length=254142 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 18971 AATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATC 19030 ||||| | | ||||| || |||| ||| |||||||||||||| || | | |||| | || Sbjct 13206 AATGGCATTGCCTCCGTGCCACATGTTTTGTCAGTTTTACGTGGCGGATGATGAACTGTC 13147 Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090 ||||| | ||||| | |||| ||||| || || || || ||||| || ||||| | Sbjct 13146 GTGCCAGATGTACCAACGCTCGGCCGATATTGGACTAGGCGTGCCGTTTAATATTGCCAG 13087 Query 19091 ATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAAT 19150 ||||| | || || | || ||||| || |||||| ||| | || || || || Sbjct 13086 CTATGCGTTGCTGACGCGTTTGGTCGCGCAAGTGGTAGGACTGAAAGCTGGCGAGTTCAT 13027 Query 19151 TCATACAATGGGGGATGCACATATTTACTTGAATCATATAGA 19192 ||| || || || || ||||| || ||||||| |||| Sbjct 13026 CCATGTCATCGGTGACGCGCATATCTATCTGAATCACGTAGA 12985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399484451145675