Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3385 109 5e-19 >seq3385 Length=38424 Score = 109 bits (120), Expect = 5e-19 Identities = 140/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGA 118608 |||||||| ||||| || | || || ||| ||| || ||||| || ||||| ||| Sbjct 14326 TTTTGAATATTGTAGTCCG--AAAGGGCACGTCCATCTTCCAGCTGCTTGCCAGCAAAGA 14383 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668 | ||||| ||||| || || || ||||| |||||||| ||||| || ||||| | || Sbjct 14384 TCAGACGTTGCTGCTCAGGCGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTAACATTTT 14443 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| | |||| | || ||||| | || | || ||||| |||| ||| ||||||| Sbjct 14444 CGATGCTGTCGGACGATTCCACCTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTTACAA 14503 Query 118729 AAATCTGCATG 118739 ||||||||||| Sbjct 14504 AAATCTGCATG 14514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433809171458380