Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq3385 104 2e-17 >seq3385 Length=38424 Score = 104 bits (114), Expect = 2e-17 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 |||||||||||| ||||| || || || || ||||| || || || | || || ||||| Sbjct 14517 CATCATGCAGATTTTTGTAAAGACTTTGACAGGCAAGACCATTACTTTGGAGGTGGAATC 14458 Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947 | |||||| | |||| ||||||| | ||||| | || |||||| | ||| ||| Sbjct 14457 GTCCGACAGCATCGAAAATGTTAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGA 14398 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGAT 24987 ||||||||| | || | ||| ||||| || ||||||||| Sbjct 14397 GCAGCAACGTCTGATCTTTGCTGGCAAGCAGCTGGAAGAT 14358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418283531208800