Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3828 93.3 8e-14 >seq3828 Length=141882 Score = 93.3 bits (102), Expect = 8e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 93538 CCCAGTTTTATGAGCTCTCTAATCACATATTCGTTCACCA-CTTGGAATGATCCTGAAAG 93596 ||||| | || |||||| | |||| || | |||||| | | || | | | || | ||| Sbjct 94273 CCCAGATCGATCAGCTCTTTCATCAGGTACTTGTTCACGATCGTGAACTCA-CCAGCAAG 94331 Query 93597 TACATTACGATTATACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGAT 93656 ||| ||||| |||||||| ||||| | ||||| | ||| || ||| || ||||| Sbjct 94332 CACACGTCGATTGTACATGTTCGACGTGTATGGCTCGATGGACTCGTTGTTACCAAGGAT 94391 Query 93657 CTGTGCAGTGGATGCAGTAGGCATGGGAGCAACAAACATTGAATTGTGAACACCATACTT 93716 ||| ||||| || ||||||||||||||||| || | || || ||| | | ||| | ||| Sbjct 94392 CTGGGCAGTCGAAGCAGTAGGCATGGGAGCCACTAGCAAAGAGTTGCGGATACCGTGCTT 94451 Query 93717 CAT 93719 || Sbjct 94452 AAT 94454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989533093634325