Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq3385 91.5 1e-13 >seq3385 Length=38424 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||| | || |||||||| | |||| |||||| || || ||||| ||||| ||| Sbjct 14359 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGTTGCTGCTCAGGCGGAATGCCTTCCTTG 14418 Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328 || ||||| ||| ||| |||| ||| | ||| ||| || || || |||||| Sbjct 14419 TCCTGGATTTTCTGCTTAACATTTTCGATGCTGTCGGACGATTCCACCTCCAAAGTAATG 14478 Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || ||||||| ||| ||||||||||| ||||| Sbjct 14479 GTCTTGCCTGTCAAAGTCTTTACAAAAATCTGCAT 14513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362161477553115