Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3385 113 4e-20 >seq3385 Length=38424 Score = 113 bits (124), Expect = 4e-20 Identities = 140/190 (74%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||||||||| || || |||| || | || ||||| ||||| Sbjct 14513 ATGCAGATTTTTGTAAAGACTTTGACAGGCAAGACCATTACTTTGGAGGTGGAATCGTCC 14454 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||| ||||| | ||||| |||||| ||||| ||||| ||||| ||||| || Sbjct 14453 GACAGCATCGAAAATGTTAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGAGCAG 14394 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG--CACTGTGGGCGATTACA 25176 || || | || ||||| ||||| || | ||||||| || | || | || | |||| Sbjct 14393 CAACGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTGCCCTTTCGG--ACTACA 14336 Query 25177 ATATTCAAAA 25186 |||||||||| Sbjct 14335 ATATTCAAAA 14326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433306796042225