Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3385 107 2e-18 >seq3385 Length=38424 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 |||||||| ||||| || | | ||| |||||| || || || ||||| |||| Sbjct 14326 TTTTGAATATTGTAGTCCGAAAGGGCACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATC 14385 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 ||||| || || || || ||||||||||| ||||| || || || || | | ||| Sbjct 14386 AGACGTTGCTGCTCAGGCGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTAACATTTTCG 14445 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 | | |||||| ||||| || |||| || | || ||||| |||| ||| ||||||||| Sbjct 14446 ATGCTGTCGGACGATTCCACCTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTTACAAAA 14505 Query 114375 ATCTGCATG 114383 ||||||||| Sbjct 14506 ATCTGCATG 14514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420113841642180