Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_009016.1 Length=38197 Score E Sequences producing significant alignments: (Bits) Value seq2061 131 4e-26 >seq2061 Length=1175 Score = 131 bits (144), Expect = 4e-26 Identities = 241/348 (69%), Gaps = 8/348 (2%) Strand=Plus/Minus Query 11223 CAACGGGTGGCAATTGTTGACTATGAAGAGCTGAGTCCGACCCAGCTGCGCATGGGGGCC 11282 || ||||| || ||||| || || || || ||| || | ||| || | |||| || Sbjct 535 CAGCGGGTCGCCATTGTGGATTACGAGGACCTGGGTGAGCGCCAACTCAGGATGGTCGCG 476 Query 11283 AAGTTTACCGGCACCCTTGAGTATGAGGTTCGGGAGATCGGCTTTTACCTCG--AGTCCG 11340 |||| ||| | ||| |||||| || | ||| |||| |||||||||| ||| | Sbjct 475 CTGTTTGATGGCGACGGTGAATATGAGATTGGCGAGTTCGGTTTTTACCTCGCCAGT--G 418 Query 11341 GCACCTTGCTGGCCGTGTACTCGGTACCGAACACCCTGCTCACGTATAAGTCGGCCAACA 11400 | ||||||||||| ||||| || || || | |||| |||||||| |||| | Sbjct 417 GGACCTTGCTGGCGGTGTATTCCGTGGCGGGGAAGTTGCTGACGTATAAAGCGGCGG-CG 359 Query 11401 GCAGCTGGATC--CAGAAGTTCACTCTGGATATCTCGCCGCTGCCAACTGACAGCGTGAC 11458 || || || | ||||||||||| |||||||| |||||| |||| | || |||||||| Sbjct 358 GC-GCGGGTGCTGCAGAAGTTCACGCTGGATATTTCGCCGTTGCCGGCGGATAGCGTGAC 300 Query 11459 CGTCGTGGTCGGTACGGAAAACATCAATCTGATGATGACCGAGGAACTGGCCACCATGGC 11518 | ||||| || | ||||| | ||| || || || | |||||||| || | ||||| Sbjct 299 GATTGTGGTGGGGAGTGAAAATTTGAATGTGTTGCTGGCGGAGGAACTCGCGATTATGGC 240 Query 11519 CACGGCCCAGATTGACAACATGACCCGGCACGTTGAGCTGCTGTTCCG 11566 | || | ||| ||| ||| |||| || || || || |||| || Sbjct 239 GGCTGCTTCGGTTGGCAATATGTCCCGCCATGTAGATTTGATGTTGCG 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122102978081370