Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1224 104 3e-17 seq413 104 3e-17 >seq1224 Length=252807 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 172762 GAGTTGCGCCACTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACC 172821 ||| ||| |||| || ||||| || ||||| | || ||||||||||| || ||||| Sbjct 48083 GAGCTGCACCACAGACGCATCACGCACATTCAAAAGTTTGCCACGGAGAGGAAAGACACC 48024 Query 172822 GTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACC 172881 ||| |||||||| || || || | |||||| || ||||| || | ||| || |||||||| Sbjct 48023 GTACTGATCACGCCCGACAACTGCAAGACCTGCCACTGCCAGTGCCTTTGCTGAATCACC 47964 Query 172882 CTCCGTCACGATGAGCG 172898 || |||| ||| |||| Sbjct 47963 TTCGGTCAGGATAAGCG 47947 >seq413 Length=106048 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 172762 GAGTTGCGCCACTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACC 172821 ||| ||| |||| || ||||| || ||||| | || ||||||||||| || ||||| Sbjct 87154 GAGCTGCACCACAGACGCATCACGCACATTCAAAAGTTTGCCACGGAGAGGAAAGACACC 87095 Query 172822 GTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACC 172881 ||| |||||||| || || || | |||||| || ||||| || | ||| || |||||||| Sbjct 87094 GTACTGATCACGCCCGACAACTGCAAGACCTGCCACTGCCAGTGCCTTTGCTGAATCACC 87035 Query 172882 CTCCGTCACGATGAGCG 172898 || |||| ||| |||| Sbjct 87034 TTCGGTCAGGATAAGCG 87018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597323620316200